RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 LBX1P52954 281 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CLDN17P56750 224 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 HUNKP57058 714 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GPX6P59796 221 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SRP54P61011 504 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 NCALDP61601 193 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 RPP38P78345 283 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 ELF3P78545 371 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 CDK16Q00536 496 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 BNIP1Q12981 228 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 DNAJC3Q13217 504 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GPR17Q13304 367 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 KCNJ11Q14654 390 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 P2RY6Q15077 328 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ZBTB6Q15916 424 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CCDC14Q49A88 953 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ZNF585BQ52M93 769 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 XKR6Q5GH73 641 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 MARCH8Q5T0T0 291 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ANKRD22Q5VYY1 191 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ARHGAP17Q68EM7 881 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ZNF324BQ6AW86 544 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 DHRS11Q6UWP2 260 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 TMEM207Q6UWW9 146 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SLC26A9Q7LBE3 791 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ARCQ7LC44 396 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 STRADAQ7RTN6 431 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 COX8CQ7Z4L0 72 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GPR142Q7Z601 462 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ADAMTSL2Q86TH1 951 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 RPAINQ86UA6 219 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SLC26A11Q86WA9 606 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 PSTKQ8IV42 348 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 CTAGE3PQ8IX95 158 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ELMOD2Q8IZ81 293 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 C4orf33Q8N1A6 199 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 FBXW8Q8N3Y1 598 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 MRPL43Q8N983 215 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 OR4A16Q8NH70 328 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 DCAKDQ8WVC6 231 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 TFB1MQ8WVM0 346 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 ZNF75CPQ92670 426 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 HAS2Q92819 552 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 TMEM186Q96B77 213 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SENP5Q96HI0 755 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 HSFY1Q96LI6 401 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 NEDD4LQ96PU5 975 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 FAM111AQ96PZ2 611 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 PEBP4Q96S96 227 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 MRPL45Q9BRJ2 306 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 NAT9Q9BTE0 207 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SNRNP25Q9BV90 132 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 FAM49AQ9H0Q0 323 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 DHX35Q9H5Z1 703 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 ZFP57Q9NU63 452 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 FAM49BQ9NUQ9 324 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ETNK2Q9NVF9 386 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 FAM118AQ9NWS6 357 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GDAP2Q9NXN4 497 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBR1-211ENST00000569971 NDUFA13Q9P0J0 144 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ACTR3BQ9P1U1 418 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 RCOR3Q9P2K3 495 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 IL36AQ9UHA7 158 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 BAIAP2L1Q9UHR4 511 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CHMP2BQ9UQN3 213 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GINS2Q9Y248 185 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ANK1P16157 1881 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 RALGAPA2Q2PPJ7 1873 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 PLXNA1Q9UIW2 1896 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SF3B1O75533 1304 aaKnown RBP eCLIP3.28□□□□□ -1.883e-6■■■■■ 137.9
UBR1-211ENST00000569971 IGHV4-61A0A0C4DH41 118 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SMIM28A0A1B0GU29 152 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TCRBV9S1A1TA0A576 114 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 CCDC162PA2VCL2 907 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 MBLAC1A4D2B0 266 aaPredicted RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 PRSS44E7EML9 344 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 M0QZ92 97 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 AP3B1O00203 1094 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 PIRO00625 290 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 XPO1O14980 1071 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 MLNRO43193 412 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TXNL1O43396 289 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 ATP6V1G1O75348 118 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 BANF1O75531 89 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 GRAP2O75791 330 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 MT-ATP6P00846 226 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 IGHV4-59P01825 116 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 CRYAAP02489 173 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 APOEP02649 317 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 MT-ND2P03891 347 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 RAF1P04049 648 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 GPIP06744 558 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SMIM10L2AP0DMW4 78 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SMIM10L2BP0DMW5 78 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 MLNP12872 115 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 CCNB1P14635 433 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 AREGP15514 252 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 AMD1P17707 334 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TPSB2P20231 275 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms