RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PSMB10P40306 273 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ZNF157P51786 506 aaPredicted RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 SNRPGP62308 76 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 ZNF169Q14929 603 aaPredicted RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 DUSP6Q16828 381 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 GRHL2Q6ISB3 625 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 SFXN4Q6P4A7 337 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 CCDC36Q8IYA8 594 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 CHST14Q8NCH0 376 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 BRI3BPQ8WY22 251 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 S100A16Q96FQ6 103 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 CD180Q99467 661 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ATF6BQ99941 703 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ISG20L2Q9H9L3 353 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 EMC7Q9NPA0 242 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 WASH6PQ9NQA3 447 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 C1GALT1Q9NS00 363 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ERI3O43414 337 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 GMDSO60547 372 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ARL6IP5O75915 188 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 FBXO45P0C2W1 286 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 APEHP13798 732 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 PCSK2P16519 638 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ANXA7P20073 488 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 ENPP1P22413 925 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 AHCYP23526 432 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 GBX2P52951 348 aaPredicted RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 MVDP53602 400 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 SFRP5Q5T4F7 317 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 TMEM107Q6UX40 140 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 POGLUT1Q8NBL1 392 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 OR13C5Q8NGS8 318 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 CASTOR1Q8WTX7 329 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 PLD4Q96BZ4 506 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 POLDIP3Q9BY77 421 aaKnown RBP10.26□□□□□ -0.77
PALB2-206ENST00000568219 ACTR6Q9GZN1 396 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 ZNF780BQ9Y6R6 833 aa10.26□□□□□ -0.77
PALB2-206ENST00000568219 TRDV1A0A1B0GX56 115 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ANXA2P2A6NMY6 339 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 POP7O75817 140 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 ANXA2P07355 339 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 CBR1P16152 277 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ACVR2AP27037 513 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 SLC6A11P48066 632 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ID2Q02363 134 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 C3orf38Q5JPI3 329 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 PLEKHS1Q5SXH7 462 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 SLC22A10Q63ZE4 541 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ZNF772Q68DY9 489 aaPredicted RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 TMEM65Q6PI78 240 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 METAP1DQ6UB28 335 aaPredicted RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 TAF8Q7Z7C8 310 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 FOXRED2Q8IWF2 684 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 OR11H7Q8NGC8 314 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 OR11H4Q8NGC9 324 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 OR56B4Q8NH76 319 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 WDR20Q8TBZ3 569 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 C4orf36Q96KX1 117 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 WDFY2Q96P53 400 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 PLA2G12AQ9BZM1 189 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 FTSJ1Q9UET6 329 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 C13orf42A0A1B0GVH6 325 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ANKRD61A6NGH8 418 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 SYN3O14994 580 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 PEX14O75381 377 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 FARS2O95363 451 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 LALBAP00709 142 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 CD22P20273 847 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 VAMP1P23763 118 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ITGA3P26006 1051 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 CD70P32970 193 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 TNK1Q13470 666 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ELOAQ14241 798 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 PUM1Q14671 1186 aaKnown RBP eCLIP10.25□□□□□ -0.77
PALB2-206ENST00000568219 FAM74A1Q5RGS3 127 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 PAQR7Q86WK9 346 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 FAM129CQ86XR2 697 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 DCAF4L2Q8NA75 395 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 OR8D4Q8NGM9 314 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 WFDC5Q8TCV5 224 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 OR5P2Q8WZ92 322 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 WBP2Q969T9 261 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 KIAA1143Q96AT1 154 aaPredicted RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 RNF170Q96K19 258 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 PDFQ9HBH1 243 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 NEUROD4Q9HD90 331 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 OR2S2Q9NQN1 319 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ASIC5Q9NY37 505 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 LHX3Q9UBR4 397 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 A0A1W2PRQ8 180 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 PRKRAO75569 313 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 NTN1O95631 604 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ACP5P13686 325 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 NDUFV2P19404 249 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 TRIM23P36406 574 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 SPINT3P49223 89 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 MRPL19P49406 292 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 LMAN2Q12907 356 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms