RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	SAMD14	Q8IZD0	417 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	PLD6	Q8N2A8	252 aa	Known RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	UHMK1	Q8TAS1	419 aa	Known RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	DUSP19	Q8WTR2	217 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	SELENOM	Q8WWX9	145 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	PHF21B	Q96EK2	531 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	C1GALT1C1	Q96EU7	318 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	TRMT61A	Q96FX7	289 aa	Known RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	ACTR6	Q9GZN1	396 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	PFDN4	Q9NQP4	134 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	YAE1D1	Q9NRH1	226 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	NMRK1	Q9NWW6	199 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	FAM120C	Q9NX05	1096 aa	Known RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	TAS2R9	Q9NYW1	312 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	FLRT3	Q9NZU0	649 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	TMCO1	Q9UM00	188 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	ABCG2	Q9UNQ0	655 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	GPR52	Q9Y2T5	361 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	OR10H1	Q9Y4A9	318 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	PPP6C	O00743	305 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	SS18L1	O75177	396 aa	Predicted RBP	10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	ESRRB	O95718	433 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	SOD3	P08294	240 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	RPS17	P08708	135 aa	Known RBP	10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	RBP1	P09455	135 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	DANCR	P0C864	163 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	PSMB1	P20618	241 aa	Known RBP	10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	TYK2	P29597	1187 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	CTBP2	P56545	445 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	ZNF844	Q08AG5	666 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	STX5	Q13190	355 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	LETMD1	Q6P1Q0	360 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	BEND4	Q6ZU67	534 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	OR7G2	Q8NG99	324 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	RAB3IL1	Q8TBN0	382 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	MTBP	Q96DY7	904 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	PRRG4	Q9BZD6	226 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	SLCO5A1	Q9H2Y9	848 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	FANCF	Q9NPI8	374 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	SLC35C2	Q9NQQ7	365 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	RNF14	Q9UBS8	474 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	MCM8	Q9UJA3	840 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	CLEC4A	Q9UMR7	237 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	SNX6	Q9UNH7	406 aa		10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	NUP214	P35658	2090 aa	Predicted RBP	10.18	□□□□□ -0.78
TCF4-238	ENST00000568169	UQCRHL	A0A096LP55	91 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	IGLV3-32	A0A0A0MS00	114 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	RAD51C	O43502	376 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	OTC	P00480	354 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	PLG	P00747	810 aa	Predicted RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	F12	P00748	615 aa	Predicted RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	IL3	P08700	152 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	HSD3B1	P14060	373 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	HSD3B2	P26439	372 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	ACVR1B	P36896	505 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	SERPINB8	P50452	374 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	PLTP	P55058	493 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	RAE1	P78406	368 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	CTU2	Q2VPK5	515 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	CHRFAM7A	Q494W8	412 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	FAM219B	Q5XKK7	198 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	RPS27L	Q71UM5	84 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	MARCH3	Q86UD3	253 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	CCDC25	Q86WR0	208 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	FAM9C	Q8IZT9	166 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	OR10D3	Q8NH80	312 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	ZNF483	Q8TF39	744 aa	Predicted RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	EXOSC8	Q96B26	276 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	KCTD12	Q96CX2	325 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	MRRF	Q96E11	262 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	HBEGF	Q99075	208 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	VPS11	Q9H270	941 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	GLRX2	Q9NS18	164 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	GIMAP4	Q9NUV9	329 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	STOML1	Q9UBI4	398 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	VPS29	Q9UBQ0	182 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	ZNF225	Q9UK10	706 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169	RNF115	Q9Y4L5	304 aa		10.17	□□□□□ -0.78
TCF4-238	ENST00000568169		A0A087WV62	115 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169		A8MV72	311 aa	Predicted RBP	10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	SHISA8	B8ZZ34	492 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	MANBA	O00462	879 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	EIF1AY	O14602	144 aa	Known RBP	10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	ADAMDEC1	O15204	470 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	PHF1	O43189	567 aa	Predicted RBP	10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	COQ9	O75208	318 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	SMIM24	O75264	130 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	IL33	O95760	270 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	C8B	P07358	591 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	CHN1	P15882	459 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	MPI	P34949	423 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	EIF1AX	P47813	144 aa	Known RBP	10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	CLK3	P49761	638 aa	Known RBP	10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	CDH13	P55290	713 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	GNG11	P61952	73 aa		10.16	□□□□□ -0.78
TCF4-238	ENST00000568169	CAV1	Q03135	178 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms