RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 DCUN1D5Q9BTE7 237 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 DOHHQ9BU89 302 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 BBS2Q9BXC9 721 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 GABARAPL3Q9BY60 117 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 RACGAP1Q9H0H5 632 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 IKZF5Q9H5V7 419 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 TMEM38AQ9H6F2 299 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 TPT1P8Q9HAU6 139 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 FANCEQ9HB96 536 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 SGK2Q9HBY8 427 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 SPHK2Q9NRA0 654 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 FARSBQ9NSD9 589 aaKnown RBP4.97□□□□□ -1.61
CAPN3-217ENST00000567817 HCFC1R1Q9NWW0 138 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 THUMPD1Q9NXG2 353 aaKnown RBP4.97□□□□□ -1.61
CAPN3-217ENST00000567817 WARS2Q9UGM6 360 aaKnown RBP4.97□□□□□ -1.61
CAPN3-217ENST00000567817 IL36AQ9UHA7 158 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 ATP6V1HQ9UI12 483 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 SERTAD3Q9UJW9 196 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 NDRG4Q9ULP0 352 aaKnown RBP4.97□□□□□ -1.61
CAPN3-217ENST00000567817 CDC14AQ9UNH5 594 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 GPR34Q9UPC5 381 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 DLGAP4Q9Y2H0 992 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 SAMHD1Q9Y3Z3 626 aaKnown RBP4.97□□□□□ -1.61
CAPN3-217ENST00000567817 GMPPBQ9Y5P6 360 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 A3GALT2U3KPV4 340 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 V9GYQ6 96 aa4.97□□□□□ -1.61
CAPN3-217ENST00000567817 SPTAN1Q13813 2472 aaKnown RBP4.97□□□□□ -1.61
CAPN3-217ENST00000567817 SAGE2PA6NJ88 616 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 HEPACAM2A8MVW5 462 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ARHGEF33A8MVX0 844 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 NEDD8-MDP1E9PL57 170 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 AREL1O15033 823 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 RRP8O43159 456 aaKnown RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 VEGFDO43915 354 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TBX19O60806 448 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 SCN2BO60939 215 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PDE9AO76083 593 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF682O95780 498 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 MT-ND1P03886 318 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 NDUFB7P17568 137 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ELK4P28324 431 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 GKP32189 559 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 SHMT2P34897 504 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PIGAP37287 484 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ALDH9A1P49189 494 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ENTPD1P49961 510 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PLA2G16P53816 162 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PROK1P58294 105 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 SELENOWP63302 87 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ZXDBP98169 803 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM115Q12893 351 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TMED1Q13445 227 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 KRR1Q13601 381 aaKnown RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 DOC2AQ14183 400 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ARHGAP19Q14CB8 494 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TRIP6Q15654 476 aaKnown RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TBCEQ15813 527 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF77Q15935 545 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ITPRIPL2Q3MIP1 535 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ZIK1Q3SY52 487 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TIMM50Q3ZCQ8 353 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 IFI44LQ53G44 452 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM196Q5HYL7 178 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 FGD3Q5JSP0 725 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TOR1AIP1Q5JTV8 583 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 GCNT6Q5T4J0 391 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 OR4F3Q6IEY1 312 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ANKRD26P1Q6NSI1 321 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 KLHL35Q6PF15 583 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ISLR2Q6UXK2 745 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF788Q6ZQV5 615 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 CCDC80Q76M96 950 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 WDR53Q7Z5U6 358 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TECPR1Q7Z6L1 1165 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 DSG4Q86SJ6 1040 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ADIPOR2Q86V24 386 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 P2RY8Q86VZ1 359 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ARMC8Q8IUR7 673 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 P3H2Q8IVL5 708 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 LAS2Q8IYD9 372 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 KRT78Q8N1N4 520 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PARP8Q8N3A8 854 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 RAB42Q8N4Z0 105 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 TTC29Q8NA56 475 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ATG16L2Q8NAA4 619 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 DENND6BQ8NEG7 585 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 C9orf43Q8TAL5 461 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 FAM110BQ8TC76 370 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PHF10Q8WUB8 498 aaKnown RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 CHPT1Q8WUD6 406 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 GEMIN6Q8WXD5 167 aaKnown RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 RAB7BQ96AH8 199 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 RAD51AP1Q96B01 352 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PPCDCQ96CD2 204 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 AP2M1Q96CW1 435 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PLEKHA8Q96JA3 519 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 INPP5KQ9BT40 448 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 LHPPQ9H008 270 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PRORYQ9H606 182 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 REEP4Q9H6H4 257 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms