RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RGS16	O15492	202 aa	Predicted RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	EMC8	O43402	210 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	TYROBP	O43914	113 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	KCNH1	O95259	989 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	UTS2	O95399	124 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	IL33	O95760	270 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	BMP5	P22003	454 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	CHM	P24386	653 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	DPP4	P27487	766 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ARRB2	P32121	409 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	EVI2B	P34910	448 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	HPCAL1	P37235	193 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	RPL3	P39023	403 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	MAP3K8	P41279	467 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	FRK	P42685	505 aa	Predicted RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ETV4	P43268	484 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	STAR	P49675	285 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	PSMD4	P55036	377 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	GFRA1	P56159	465 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	DLX5	P56178	289 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	WNT3	P56703	355 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	RPL38	P63173	70 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF844	Q08AG5	666 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	PDE7A	Q13946	482 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	VPS26B	Q4G0F5	336 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ATP6AP1L	Q52LC2	224 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF385B	Q569K4	471 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	XKR7	Q5GH72	579 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	C6orf136	Q5SQH8	315 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	DCST1	Q5T197	706 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	CES4A	Q5XG92	561 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	AAGAB	Q6PD74	315 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ARSK	Q6UWY0	536 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	IFNE	Q86WN2	208 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	CDRT4	Q8N9R6	151 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR4K17	Q8NGC6	315 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	GPR151	Q8TDV0	419 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	DUSP19	Q8WTR2	217 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	HOXB13	Q92826	284 aa	Predicted RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	C3orf30	Q96M34	536 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	PRPF18	Q99633	342 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF559	Q9BR84	538 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	DSN1	Q9H410	356 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	SSU72	Q9NP77	194 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	EQTN	Q9NQ60	294 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	FAM120C	Q9NX05	1096 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	MED11	Q9P086	117 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	PPP4R1L	Q9P1A2	415 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	GIMAP2	Q9UG22	337 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	KCNN3	Q9UGI6	736 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ATP6V1H	Q9UI12	483 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZDHHC2	Q9UIJ5	367 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	DKKL1	Q9UK85	242 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ABCG2	Q9UNQ0	655 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	PRRC2A	P48634	2157 aa	Known RBP	6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ARID1A	O14497	2285 aa		6.28	□□□□□ -1.4
SF3B3-209	ENST00000567635	ROS1	P08922	2347 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	FBN2	P35556	2912 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635		A0A1W2PRB8	838 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	WDR91	A4D1P6	747 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	MBD3L3	A6NE82	208 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	MBD3L5	A6NJ08	208 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635		H0Y3Z8	333 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	SCO2	O43819	266 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	LYPLA1	O75608	230 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	SOX30	O94993	753 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	NKX2-2	O95096	273 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	SNUPN	O95149	360 aa	Known RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	HSPA4L	O95757	839 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	IL18BP	O95998	194 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	IGKV1D-16	P01601	117 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	SERPINE1	P05121	402 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	ALOX5	P09917	674 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	LAMP1	P11279	417 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	HK1	P19367	917 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	EFNA1	P20827	205 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	PRPS1L1	P21108	318 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	CTSS	P25774	331 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	UQCRC1	P31930	480 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	OPRM1	P35372	400 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	PEX19	P40855	299 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	RFX3	P48380	749 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	SERPINB4	P48594	390 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	LHX2	P50458	406 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	AGFG1	P52594	562 aa	Known RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF136	P52737	540 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	DSCR4	P56555	118 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	KRTAP10-9	P60411	292 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	PRR5	P85299	388 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	EMX2	Q04743	252 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	C17orf67	Q0P5P2	114 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	MYBPH	Q13203	477 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	MLC1	Q15049	377 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	BCL2A1	Q16548	175 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	LSM12	Q3MHD2	195 aa	Known RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	FBXL19-AS1	Q494R0	122 aa		6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	GLYR1	Q49A26	553 aa	Predicted RBP	6.27	□□□□□ -1.41
SF3B3-209	ENST00000567635	CPTP	Q5TA50	214 aa		6.27	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms