RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 OR5M1Q8NGP8 315 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 OR2W6PQ8NHA6 318 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 DUSP19Q8WTR2 217 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 PIK3R3Q92569 461 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 HOXB13Q92826 284 aaPredicted RBP16.55■□□□□ 0.24
USB1-213ENST00000566292 ZNF764Q96H86 408 aaPredicted RBP16.55■□□□□ 0.24
USB1-213ENST00000566292 ACBD3Q9H3P7 528 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 EQTNQ9NQ60 294 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 SDHAF3Q9NRP4 125 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 MID2Q9UJV3 735 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 ZNF337Q9Y3M9 751 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 ACANP16112 2415 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 VPS13CQ709C8 3753 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 A0A1W2PNV4 684 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 A8MXE2 369 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 H0YC42 278 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 AKAP10O43572 662 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 TBX19O60806 448 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 TRIM13O60858 407 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 UTS2O95399 124 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 LINC00032P0C843 101 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 PEPDP12955 493 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 CPA2P48052 419 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 SUCLG1P53597 346 aaKnown RBP16.54■□□□□ 0.24
USB1-213ENST00000566292 TPD52P55327 224 aaPredicted RBP16.54■□□□□ 0.24
USB1-213ENST00000566292 GANABQ14697 944 aaKnown RBP16.54■□□□□ 0.24
USB1-213ENST00000566292 RFTN2Q52LD8 501 aaPredicted RBP16.54■□□□□ 0.24
USB1-213ENST00000566292 RAET1LQ5VY80 246 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 KANK2Q63ZY3 851 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 APOOLQ6UXV4 268 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 CLHC1Q8NHS4 586 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 TSSK3Q96PN8 268 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 CCT7Q99832 543 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 TRMOQ9BU70 441 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 PIGMQ9H3S5 423 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 REEP4Q9H6H4 257 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 MKS1Q9NXB0 559 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 BAIAP2L1Q9UHR4 511 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 MRTO4Q9UKD2 239 aaKnown RBP16.54■□□□□ 0.24
USB1-213ENST00000566292 DNAJC15Q9Y5T4 150 aa16.54■□□□□ 0.24
USB1-213ENST00000566292 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 OR2M5A3KFT3 312 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 TTC36A6NLP5 189 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 TMEM233B4DJY2 109 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 LSM1O15116 133 aaKnown RBP16.53■□□□□ 0.24
USB1-213ENST00000566292 CHRNGP07510 517 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 PRPS2P11908 318 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 NEFHP12036 1026 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 DNASE1P24855 282 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 FRKP42685 505 aaPredicted RBP16.53■□□□□ 0.24
USB1-213ENST00000566292 PSMD4P55036 377 aaKnown RBP16.53■□□□□ 0.24
USB1-213ENST00000566292 RPL38P63173 70 aaKnown RBP16.53■□□□□ 0.24
USB1-213ENST00000566292 PDE7AQ13946 482 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 GRAMD1BQ3KR37 738 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 PAMR1Q6UXH9 720 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 P4HA3Q7Z4N8 544 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 EXOC3L1Q86VI1 746 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 BANPQ8N9N5 519 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 C1GALT1C1Q96EU7 318 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 GIMAP5Q96F15 307 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 APOPT1Q96IL0 206 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 TMUB1Q9BVT8 246 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 ANKZF1Q9H8Y5 726 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 C3orf14Q9HBI5 128 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 PACSIN3Q9UKS6 424 aa16.53■□□□□ 0.24
USB1-213ENST00000566292 NUP214P35658 2090 aaPredicted RBP16.53■□□□□ 0.24
USB1-213ENST00000566292 IGLV3-32A0A0A0MS00 114 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 TLDC2A0PJX2 215 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 SLC22A20A6NK97 555 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 NKX2-2O95096 273 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 ANGPTL1O95841 491 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 ALDH3A1P30838 453 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 GPC1P35052 558 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 CLDN20P56880 219 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 PRR5P85299 388 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 UGT3A2Q3SY77 523 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 GALNTL6Q49A17 601 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 FBXW10Q5XX13 1052 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 VWA1Q6PCB0 445 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 CHMP1BQ7LBR1 199 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 GALNT10Q86SR1 603 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 TRABD2AQ86V40 505 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 MEIOBQ8N635 442 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 NUP43Q8NFH3 380 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 GPR151Q8TDV0 419 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.52■□□□□ 0.24
USB1-213ENST00000566292 FIG4Q92562 907 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 PPCDCQ96CD2 204 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 STARD4Q96DR4 205 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 TRIM44Q96DX7 344 aaPredicted RBP16.52■□□□□ 0.24
USB1-213ENST00000566292 DACH2Q96NX9 599 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 YIPF4Q9BSR8 244 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 MECRQ9BV79 373 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 PTGES2Q9H7Z7 377 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 PLEKHF2Q9H8W4 249 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 SH3BP4Q9P0V3 963 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 NTMQ9P121 344 aa16.52■□□□□ 0.24
USB1-213ENST00000566292 FLNAP21333 2647 aaKnown RBP16.51■□□□□ 0.23
USB1-213ENST00000566292 A0A1W2PPR1 153 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms