RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ZSCAN32Q9NX65 697 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 PTGFRNQ9P2B2 879 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 SUSD2Q9UGT4 822 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 SERTAD3Q9UJW9 196 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 ENPP4Q9Y6X5 453 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 BOD1L1Q8NFC6 3051 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 SDK2Q58EX2 2172 aa5.78□□□□□ -1.48
CHD9-217ENST00000565832 MN1Q10571 1320 aaPredicted RBP5.78□□□□□ -1.48
CHD9-217ENST00000565832 A0A0G2JPF8 293 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 LOC100130705A0A1B0GUX0 176 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 HNRNPCL2B2RXH8 293 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 HNRNPCL3B7ZW38 293 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CLDN4O14493 209 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 OR6B1O95007 311 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 GADD45GO95257 159 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 BMP10O95393 424 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CPNE6O95741 557 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 IGKV1D-16P01601 117 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 TFAP2AP05549 437 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 HNRNPCL4P0DMR1 293 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 IL7RP16871 459 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 TNNI3P19429 210 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 IGFBP5P24593 272 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 TRHRP34981 398 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 ARHGDIAP52565 204 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CLDN6P56747 220 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PSG6Q00889 435 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PIGFQ07326 219 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 RAPSNQ13702 412 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 POU4F3Q15319 338 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 NPTX1Q15818 432 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 MICAQ29983 383 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CCDC157Q569K6 752 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 LCN10Q6JVE6 187 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 HEPHL1Q6MZM0 1159 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PWWP2BQ6NUJ5 590 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CDC73Q6P1J9 531 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 TTC33Q6PID6 262 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 SATL1Q86VE3 508 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CCDC71Q8IV32 467 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 GPR135Q8IZ08 494 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 METTL25Q8N6Q8 603 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 OR4C15Q8NGM1 316 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CNIH3Q8TBE1 160 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 IFI44Q8TCB0 444 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PTPMT1Q8WUK0 201 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 TRNT1Q96Q11 434 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 ALPK1Q96QP1 1244 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CD180Q99467 661 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 LRRN3Q9H3W5 708 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 ZNF768Q9H5H4 540 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 CCDC86Q9H6F5 360 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 LIN28AQ9H9Z2 209 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 BCL2L10Q9HD36 194 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 SLC22A11Q9NSA0 550 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 CTSFQ9UBX1 484 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 FBXO4Q9UKT5 387 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 A4GNTQ9UNA3 340 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 ERVK-19Q9WJR5 959 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 FAM32AQ9Y421 112 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 PTPRZ1P23471 2315 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 SPTBN2O15020 2390 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 ZNF318Q5VUA4 2279 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 IGHV3-20A0A0C4DH32 117 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 VGLL3A8MV65 326 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 C17orf105B2RV13 164 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 H3BNH8 94 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 M0R129 80 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 TM4SF5O14894 197 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 LGI1O95970 557 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PABPC4LP0CB38 370 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 GKN3PP0CG01 181 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PRG2P13727 222 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 RHCEP18577 417 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 MAP3K8P41279 467 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 LIMS1P48059 325 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 ISL1P61371 349 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 MAP4K2Q12851 820 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 SMN1Q16637 294 aaKnown RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 ARHGAP11BQ3KRB8 267 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 FGD3Q5JSP0 725 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PHF19Q5T6S3 580 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 ATAD3BQ5T9A4 648 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 GARNL3Q5VVW2 1013 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 TMEM236Q5W0B7 351 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 LAIR1Q6GTX8 287 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 FAHD1Q6P587 224 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 SLC23A3Q6PIS1 610 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 ZNF605Q86T29 641 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 DMRTC2Q8IXT2 367 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 ZNF595Q8IYB9 648 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 SAMD14Q8IZD0 417 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 ST13P4Q8IZP2 240 aaPredicted RBP5.77□□□□□ -1.49
CHD9-217ENST00000565832 FAM169BQ8N8A8 192 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 GALNT11Q8NCW6 608 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 PIK3C3Q8NEB9 887 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 OR6C4Q8NGE1 309 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 OR52P1PQ8NH57 321 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 C16orf52Q8NHV5 167 aa5.77□□□□□ -1.49
CHD9-217ENST00000565832 SLC7A13Q8TCU3 470 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms