RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PIP5K1AQ99755 562 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 LMF2Q9BU23 707 aaKnown RBP7.73□□□□□ -1.17
CAPN3-213ENST00000565173 TXLNGYQ9BZA5 131 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 SHCBP1LQ9BZQ2 653 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 OPN3Q9H1Y3 402 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-213ENST00000565173 TNFRSF12AQ9NP84 129 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 MID1IP1Q9NPA3 183 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 GIMAP4Q9NUV9 329 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 KLHL28Q9NXS3 571 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 PPP4R1LQ9P1A2 415 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 GRID1Q9ULK0 1009 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 NFU1Q9UMS0 254 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 ABCG2Q9UNQ0 655 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 OR10H1Q9Y4A9 318 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 CCL27Q9Y4X3 112 aa7.73□□□□□ -1.17
CAPN3-213ENST00000565173 ABCA2Q9BZC7 2435 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 IGLV3-32A0A0A0MS00 114 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 A0A1W2PPM1 405 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 GXYLT2A0PJZ3 443 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 OR2M5A3KFT3 312 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 LINC01387J3KSC0 135 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 EMC8O43402 210 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 COQ9O75208 318 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 AQP8O94778 261 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 SLITRK5O94991 958 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 IGKV1D-16P01601 117 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 FAM153BP0C7A2 387 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 CD8BP10966 210 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 CRYGSP22914 178 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 MRPS22P82650 360 aaKnown RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 OCRLQ01968 901 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 ZNF155Q12901 538 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 SLC29A2Q14542 456 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 GANABQ14697 944 aaKnown RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 DECR1Q16698 335 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 FAM153CQ494X1 144 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 GLYR1Q49A26 553 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 SH2D4BQ5SQS7 431 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 RAET1LQ5VY80 246 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 NOXRED1Q6NXP6 359 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 Q71RC1 249 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 TRMT10CQ7L0Y3 403 aaKnown RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 P4HA3Q7Z4N8 544 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 GGNQ86UU5 652 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 LRRC75A-AS1Q8N1F1 130 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 CIARTQ8N365 385 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 MEIOBQ8N635 442 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 METTL25Q8N6Q8 603 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 ZNF610Q8N9Z0 462 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 FAM76AQ8TAV0 307 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 C1GALT1C1Q96EU7 318 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 EGLN2Q96KS0 407 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 PINK1Q9BXM7 581 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 MYNNQ9NPC7 610 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 FAM120CQ9NX05 1096 aaKnown RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 ELOVL5Q9NYP7 299 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 SENP1Q9P0U3 644 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 DCDC2Q9UHG0 476 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 EIF3LQ9Y262 564 aaKnown RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 STK38LQ9Y2H1 464 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 WBP11Q9Y2W2 641 aaKnown RBP7.72□□□□□ -1.17
CAPN3-213ENST00000565173 ZNF175Q9Y473 711 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 AP4B1Q9Y6B7 739 aa7.72□□□□□ -1.17
CAPN3-213ENST00000565173 FN1P02751 2386 aaKnown RBP7.71□□□□□ -1.17
CAPN3-213ENST00000565173 FBN1P35555 2871 aaKnown RBP7.71□□□□□ -1.17
CAPN3-213ENST00000565173 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 CCDC151A5D8V7 595 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 NPIPB8E9PQR5 432 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 H3BML4 177 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 C16orf97H3BN30 126 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 RSL1D1O76021 490 aaKnown RBP7.71□□□□□ -1.18
CAPN3-213ENST00000565173 ANGPTL1O95841 491 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 THBDP07204 575 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 IFI6P09912 130 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 GABRA3P34903 492 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 SLC6A8P48029 635 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 EEFSECP57772 596 aaKnown RBP7.71□□□□□ -1.18
CAPN3-213ENST00000565173 SIRPAP78324 504 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 PRR5P85299 388 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 C17orf67Q0P5P2 114 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 STX5Q13190 355 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 PON3Q15166 354 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 ACKR1Q16570 336 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.71□□□□□ -1.18
CAPN3-213ENST00000565173 GRAMD1BQ3KR37 738 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 CLEC9AQ6UXN8 241 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 ZYG11AQ6WRX3 759 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 FRMD7Q6ZUT3 714 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 FAM214BQ7L5A3 538 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 CHMP1BQ7LBR1 199 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF551Q7Z340 670 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF550Q7Z398 422 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 EXOC3L1Q86VI1 746 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 CCNYL1Q8N7R7 359 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 OR4C3Q8NH37 302 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 CDC26Q8NHZ8 85 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 PPP1R14CQ8TAE6 165 aa7.71□□□□□ -1.18
CAPN3-213ENST00000565173 IGFBPL1Q8WX77 278 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms