RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SLC35G5Q96KT7 338 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 RBP7Q96R05 134 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 ADAM30Q9UKF2 790 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 NUP50Q9UKX7 468 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 A0A1W2PRQ8 180 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 SLC9B1P1A6NJY1 282 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 TBX6O95947 436 aaPredicted RBP19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 AHCYP23526 432 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 PITPNBP48739 271 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 RAB14P61106 215 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 E2F1Q01094 437 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 LIPIQ6XZB0 460 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 TMEM99Q8N816 258 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 ANKRD53Q8N9V6 530 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 B3GNT4Q9C0J1 378 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 CCDC86Q9H6F5 360 aaKnown RBP19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 A4GALTQ9NPC4 353 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 TRHRP34981 398 aaPredicted RBP19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 SMIM11AP58511 58 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 C1orf94Q6P1W5 598 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 TMEM107Q6UX40 140 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 GAREM2Q75VX8 874 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 OR5P2Q8WZ92 322 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 SAMD8Q96LT4 415 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 FGF20Q9NP95 211 aaPredicted RBP19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 HINT3Q9NQE9 182 aaKnown RBP19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 ZC4H2Q9NQZ6 224 aa19.21■□□□□ 0.67
MAP1LC3B-206ENST00000564844 LINC00862A6NCI5 91 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TPOP07202 933 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 POU3F2P20265 443 aaPredicted RBP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CEACAM19Q7Z692 300 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SLC51BQ86UW2 128 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR9A1PQ8NGU1 263 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DPAGT1Q9H3H5 408 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RANBP3Q9H6Z4 567 aaPredicted RBP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DIABLOQ9NR28 239 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 P2RX2Q9UBL9 471 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SLC13A4Q9UKG4 626 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GYPBP06028 91 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ELFN1P0C7U0 828 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PTHLHP12272 177 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PPP2R1BP30154 601 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RPL3P39023 403 aaKnown RBP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CLCNKAP51800 687 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 NCBP2P52298 156 aaKnown RBP eCLIP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ELAVL2Q12926 359 aaKnown RBP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 MS4A15Q8N5U1 240 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR8K5Q8NH50 307 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GANCQ8TET4 914 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FUZQ9BT04 418 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HCAR1Q9BXC0 346 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 WSB2Q9NYS7 404 aaPredicted RBP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SLC25A13Q9UJS0 675 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RWDD3Q9Y3V2 267 aa19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PCYT1BQ9Y5K3 369 aaPredicted RBP19.2■□□□□ 0.66
MAP1LC3B-206ENST00000564844 A0A1W2PRG6 482 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 KPNA3O00505 521 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PCSK2P16519 638 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HCCSP53701 268 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DSG2Q14126 1118 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GRK1Q15835 563 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FAAP20Q6NZ36 180 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CD200R1LQ6Q8B3 271 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 Q6ZNB5 142 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FIBINQ8TAL6 211 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 LINC00052Q96N35 136 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DDOQ99489 341 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TRAF4Q9BUZ4 470 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ENKD1Q9H0I2 346 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 AUNIPQ9H7T9 357 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RPS10-NUDT3A0A1W2PQS6 291 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FOXE1O00358 373 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RNF13O43567 381 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FZD7O75084 574 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HMGN2P05204 90 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ACSL1P33121 698 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TAGLNQ01995 201 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OC90Q02509 493 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ZNF33BQ06732 778 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PRAMEF14Q5SWL7 426 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PRAMEF13Q5VWM6 474 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CCSAPQ6IQ19 270 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ZNF322Q6U7Q0 402 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SERPINA12Q8IW75 414 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PCSK9Q8NBP7 692 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ZNF485Q8NCK3 441 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR5M3Q8NGP4 307 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FGF11Q92914 225 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 COQ10AQ96MF6 247 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 UBQLN2Q9UHD9 624 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ABT1Q9ULW3 272 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 J3QLW9 94 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GPR171O14626 319 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ZNF19P17023 458 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PAICSP22234 425 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PNLIPRP1P54315 467 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 POLR2LP62875 67 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 EFNB1P98172 346 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PLA2G15Q8NCC3 412 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 C2orf15Q8WU43 125 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms