RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 HOXB4P17483 251 aaPredicted RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 PIGAP37287 484 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 ADH7P40394 386 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 MANFP55145 182 aaKnown RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 ZNF155Q12901 538 aaPredicted RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 SLC10A1Q14973 349 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 TBCELQ5QJ74 424 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 C1orf185Q5T7R7 199 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 WLSQ5T9L3 541 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 SLC35A4Q96G79 324 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 LMF2Q9BU23 707 aaKnown RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 POLDIP3Q9BY77 421 aaKnown RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 BHLHE41Q9C0J9 482 aaPredicted RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 CCM2LQ9NUG4 571 aaPredicted RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 ATAD3AQ9NVI7 634 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 TUBA8Q9NY65 449 aaPredicted RBP17.27■□□□□ 0.36
NME3-207ENST00000564628 B4GALT7Q9UBV7 327 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 ST6GALNAC2Q9UJ37 374 aa17.27■□□□□ 0.36
NME3-207ENST00000564628 FREM3P0C091 2139 aa17.27■□□□□ 0.35
NME3-207ENST00000564628 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 OR6C70A6NIJ9 312 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 TSPAN2O60636 221 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 CELA3AP09093 270 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 KITP10721 976 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 GABRA1P14867 456 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 KLK2P20151 261 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 EFNA1P20827 205 aaPredicted RBP17.26■□□□□ 0.35
NME3-207ENST00000564628 GPC1P35052 558 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 MAP3K8P41279 467 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 PLCXD2Q0VAA5 305 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 EXOSC6Q5RKV6 272 aaKnown RBP17.26■□□□□ 0.35
NME3-207ENST00000564628 RIPPLY2Q5TAB7 128 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 PRAMEF20Q5VT98 475 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 NUP54Q7Z3B4 507 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 PIGWQ7Z7B1 504 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 RNF138Q8WVD3 245 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 GIMAP5Q96F15 307 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 PRPF18Q99633 342 aaKnown RBP17.26■□□□□ 0.35
NME3-207ENST00000564628 ELAC2Q9BQ52 826 aaKnown RBP17.26■□□□□ 0.35
NME3-207ENST00000564628 LDAHQ9H6V9 325 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 WDR55Q9H6Y2 383 aaPredicted RBP17.26■□□□□ 0.35
NME3-207ENST00000564628 AIG1Q9NVV5 245 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 KLHL14Q9P2G3 628 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 EDARQ9UNE0 448 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 PCDHGB3Q9Y5G1 929 aa17.26■□□□□ 0.35
NME3-207ENST00000564628 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.26■□□□□ 0.35
NME3-207ENST00000564628 LRRC3CA6NJW4 275 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 TTC36A6NLP5 189 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 UGT2B11O75310 529 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 TRIM3O75382 744 aaPredicted RBP17.25■□□□□ 0.35
NME3-207ENST00000564628 EPHA3P29320 983 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 KIR2DL3P43628 341 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 RPP38P78345 283 aaKnown RBP17.25■□□□□ 0.35
NME3-207ENST00000564628 BICRALQ6AI39 1079 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 SPATA21Q7Z572 469 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 SPATA19Q7Z5L4 167 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 ZZZ3Q8IYH5 903 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 ANKS4BQ8N8V4 417 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 OR8J2Q8NGG1 315 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 ACTRT2Q8TDY3 377 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 OR5P2Q8WZ92 322 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 DIO2Q92813 273 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 TMBIM1Q969X1 311 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 TESCQ96BS2 214 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 DUSP26Q9BV47 211 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 ANGPTL4Q9BY76 406 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 CLEC4MQ9H2X3 399 aaPredicted RBP17.25■□□□□ 0.35
NME3-207ENST00000564628 RASSF1Q9NS23 344 aa17.25■□□□□ 0.35
NME3-207ENST00000564628 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
NME3-207ENST00000564628 PRRC2AP48634 2157 aaKnown RBP17.25■□□□□ 0.35
NME3-207ENST00000564628 MAP1AP78559 2803 aaPredicted RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 TRGV5A0A0B4J1U4 118 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 A0A1W2PRB8 838 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 SYT5O00445 386 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 SNX3O60493 162 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 ABCB7O75027 752 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 CASP3P42574 277 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 WNT3P56703 355 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 KCNJ2P63252 427 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 CYP27C1Q4G0S4 372 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 SLC9B1Q4ZJI4 515 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 DESI1Q6ICB0 168 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 WDR53Q7Z5U6 358 aaPredicted RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 SLC44A2Q8IWA5 706 aaPredicted RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 OR4N2Q8NGD1 307 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 FAM120BQ96EK7 910 aaKnown RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 RMND5BQ96G75 393 aaPredicted RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 COL21A1Q96P44 957 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 MS4A4EQ96PG1 132 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 NODALQ96S42 347 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 DPY30Q9C005 99 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 RABEP2Q9H5N1 569 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 ZFP64Q9NPA5 681 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 BOKQ9UMX3 212 aaPredicted RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 GPR45Q9Y5Y3 372 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 USH1CQ9Y6N9 552 aa17.24■□□□□ 0.35
NME3-207ENST00000564628 ZNF469Q96JG9 3925 aaPredicted RBP17.24■□□□□ 0.35
NME3-207ENST00000564628 ANKHD1Q8IWZ3 2542 aaKnown RBP17.23■□□□□ 0.35
NME3-207ENST00000564628 GOLGA8QA0A0J9YX86 632 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms