RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PHYHIPQ92561 330 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 IL22RA2Q969J5 263 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 NDUFAF3Q9BU61 184 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 EHFQ9NZC4 300 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 CA11O75493 328 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 GOSR1O95249 250 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 TIMP1P01033 207 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 ZNF45Q02386 682 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 WASHC5Q12768 1159 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 ELAVL3Q14576 367 aaKnown RBP2.97□□□□□ -1.93
UBR1-205ENST00000564540 KCNJ11Q14654 390 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 PSMG2Q969U7 264 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 HAVCR1Q96D42 359 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 SPATA13Q96N96 652 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 NICN1Q9BSH3 213 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 GLIPR2Q9H4G4 154 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 NANOGQ9H9S0 305 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 DUS2Q9NX74 493 aaKnown RBP2.97□□□□□ -1.93
UBR1-205ENST00000564540 EXOSC1Q9Y3B2 195 aaKnown RBP2.97□□□□□ -1.93
UBR1-205ENST00000564540 GPRASP1Q5JY77 1395 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 ANKRD30BQ9BXX2 1392 aa2.97□□□□□ -1.93
UBR1-205ENST00000564540 GRIN2DO15399 1336 aa2.96□□□□□ -1.93
UBR1-205ENST00000564540 DHRS7CA6NNS2 312 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 LYPLA1O75608 230 aaPredicted RBP2.96□□□□□ -1.94
UBR1-205ENST00000564540 SCRG1O75711 98 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 ANP32DO95626 131 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 SEMG1P04279 462 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 CDH5P33151 784 aaPredicted RBP2.96□□□□□ -1.94
UBR1-205ENST00000564540 MAGEA4P43358 317 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 IL9RQ01113 521 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 OTUD4Q01804 1114 aaKnown RBP2.96□□□□□ -1.94
UBR1-205ENST00000564540 SRYQ05066 204 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 ZP4Q12836 540 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 CARTPTQ16568 116 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 PARP6Q2NL67 630 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 HFEQ30201 348 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 AGKQ53H12 422 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 GOLGA7Q7Z5G4 137 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 UNC45BQ8IWX7 931 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 PEX5LQ8IYB4 626 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 OR8H1Q8NGG4 311 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 WDR36Q8NI36 951 aaKnown RBP2.96□□□□□ -1.94
UBR1-205ENST00000564540 PSMA8Q8TAA3 256 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 SRSF12Q8WXF0 261 aaKnown RBP2.96□□□□□ -1.94
UBR1-205ENST00000564540 ART4Q93070 314 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 ONECUT1Q9UBC0 465 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 TEX264Q9Y6I9 313 aa2.96□□□□□ -1.94
UBR1-205ENST00000564540 PPIHO43447 177 aaKnown RBP2.95□□□□□ -1.94
UBR1-205ENST00000564540 RAMP1O60894 148 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 GPX5O75715 221 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 JCHAINP01591 159 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 ZCCHC18P0CG32 403 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 SRP54P61011 504 aaKnown RBP2.95□□□□□ -1.94
UBR1-205ENST00000564540 SSTP61278 116 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 PLOD1Q02809 727 aaPredicted RBP2.95□□□□□ -1.94
UBR1-205ENST00000564540 GFPT1Q06210 699 aaPredicted RBP2.95□□□□□ -1.94
UBR1-205ENST00000564540 EGFEM1PQ0D2K5 195 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 UBE2V2Q15819 145 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 ZNF630Q2M218 657 aaPredicted RBP2.95□□□□□ -1.94
UBR1-205ENST00000564540 LRIT3Q3SXY7 679 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 AGBL2Q5U5Z8 902 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 SLX4IPQ5VYV7 408 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 OR5M10Q6IEU7 315 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 LEG1Q6P5S2 330 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 CCDC91Q7Z6B0 441 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 ARFGAP2Q8N6H7 521 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 TMEM185AQ8NFB2 350 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 NEIL2Q969S2 332 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 TADA1Q96BN2 335 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 TMEM80Q96HE8 168 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 VPS39Q96JC1 886 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 SLC25A39Q9BZJ4 359 aaPredicted RBP2.95□□□□□ -1.94
UBR1-205ENST00000564540 SIRPDQ9H106 197 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 COMMD8Q9NX08 183 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 GHRLQ9UBU3 117 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 PPIAL4AQ9Y536 164 aa2.95□□□□□ -1.94
UBR1-205ENST00000564540 ARHGAP21Q5T5U3 1957 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 MYO10Q9HD67 2058 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 ZNFX1Q9P2E3 1918 aaKnown RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 FBLL1A6NHQ2 334 aaKnown RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 K7ENP7 123 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 TM9SF1O15321 606 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 TBL1XO60907 577 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 HSF2BPO75031 334 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 MT-ND3P03897 115 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 STSP08842 583 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 SLC35G4P0C7Q5 338 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 GABRR1P24046 479 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 ATP6V1E1P36543 226 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 LIM2P55344 173 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 MRPS6P82932 125 aaKnown RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 OC90Q02509 493 aaPredicted RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 TLE4Q04727 773 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 LRRC63Q05C16 580 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 AP1B1Q10567 949 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 ZSWIM7Q19AV6 140 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 TFDP3Q5H9I0 405 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 SULT1C3Q6IMI6 304 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 ZNF562Q6V9R5 426 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 P4HA3Q7Z4N8 544 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms