RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 HOXB13Q92826 284 aaPredicted RBP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 TUBGCP3Q96CW5 907 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 OTUB1Q96FW1 271 aaPredicted RBP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 C3orf14Q9HBI5 128 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 SSU72Q9NP77 194 aaKnown RBP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 SIRT3Q9NTG7 399 aaPredicted RBP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 MED11Q9P086 117 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 MRTO4Q9UKD2 239 aaKnown RBP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 POLQO75417 2590 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MBD3L4A6NDZ8 208 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MBD3L3A6NE82 208 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MBD3L5A6NJ08 208 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 TTC36A6NLP5 189 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 DVL2O14641 736 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 ZIC3O60481 467 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 NKX2-2O95096 273 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 KCNH1O95259 989 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 IL2RAP01589 272 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 SERPINE1P05121 402 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 CPN1P15169 458 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 SNTB1Q13884 538 aaKnown RBP18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 RCAN2Q14206 197 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 PDCD2Q16342 344 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 IL23RQ5VWK5 629 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MFSD12Q6NUT3 480 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 POMZP3Q6PJE2 187 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 ENPP6Q6UWR7 440 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MARCH3Q86UD3 253 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 KRTCAP2Q8N6L1 136 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 ZNF781Q8N8C0 355 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 CDRT4Q8N9R6 151 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 CEP70Q8NHQ1 597 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MBD3L2Q8NHZ7 208 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 ZPLD1Q8TCW7 415 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 DTNBP1Q96EV8 351 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 PPP1R36Q96LQ0 422 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 YIPF4Q9BSR8 244 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 G6PC3Q9BUM1 346 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 CALHM2Q9HA72 323 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 MCCC2Q9HCC0 563 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 NTMQ9P121 344 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 DOCK7Q96N67 2140 aa18.11■□□□□ 0.49
SHCBP1-203ENST00000564272 ENO4A6NNW6 628 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 EMC8O43402 210 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 DHRS4L1P0CG22 281 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 AGFG1P52594 562 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 PSMD4P55036 377 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 DSCR4P56555 118 aaPredicted RBP18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 B3GALT5-AS1P59052 145 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 ABCE1P61221 599 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 MPP2Q14168 576 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 DUSP5Q16690 384 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 GRAMD1BQ3KR37 738 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 VPS26BQ4G0F5 336 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 AAGABQ6PD74 315 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 SLC16A11Q8NCK7 471 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 FAM120BQ96EK7 910 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 C16orf58Q96GQ5 468 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 MRPS18CQ9Y3D5 142 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 L3MBTL1Q9Y468 752 aa18.1■□□□□ 0.49
SHCBP1-203ENST00000564272 A0A1W2PRB8 838 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 CLCA1A8K7I4 914 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 TM9SF1O15321 606 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 BIRC5O15392 142 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 DDX5P17844 614 aaKnown RBP18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 HK1P19367 917 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 UQCRC1P31930 480 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 RPL3P39023 403 aaKnown RBP18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 ASCL1P50553 236 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 CLDN18P56856 261 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 MYBPHQ13203 477 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 MLC1Q15049 377 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 TNFAIP8L3Q5GJ75 292 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 CPTPQ5TA50 214 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 FIGNL1Q6PIW4 674 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 APOOLQ6UXV4 268 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 ZAR1Q86SH2 424 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 DUSP19Q8WTR2 217 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 JADE3Q92613 823 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 SH3GL2Q99962 352 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 ZNF559Q9BR84 538 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 TBL1XR1Q9BZK7 514 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 C20orf27Q9GZN8 174 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 KCNK9Q9NPC2 374 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 SDHAF3Q9NRP4 125 aa18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 ZCCHC3Q9NUD5 404 aaKnown RBP18.09■□□□□ 0.49
SHCBP1-203ENST00000564272 GMFGO60234 142 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 ANGPTL1O95841 491 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 ALOX5P09917 674 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 G6PDP11413 515 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 ZNF708P17019 499 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 BGNP21810 368 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 CHMP24386 653 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 CLK3P49761 638 aaKnown RBP18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 DGKQP52824 942 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 PRR5P85299 388 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 EXOSC6Q5RKV6 272 aaKnown RBP18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 RAET1LQ5VY80 246 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 ADGRE4PQ86SQ3 457 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 OR5M1Q8NGP8 315 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms