RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 OR4N5Q8IXE1 308 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 TMEM52Q8NDY8 209 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 C9orf16Q9BUW7 83 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 LRRN3Q9H3W5 708 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 ZNF768Q9H5H4 540 aaKnown RBP16.54■□□□□ 0.24
GDE1-203ENST00000564172 ENAMQ9NRM1 1142 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 DCAF13Q9NV06 445 aaKnown RBP16.54■□□□□ 0.24
GDE1-203ENST00000564172 KIF17Q9P2E2 1029 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 FRYLO94915 3013 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 TMEM150CB9EJG8 249 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 M0R3G1 203 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 OR2B3O76000 313 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 GABARAPO95166 117 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 APOA1P02647 267 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 SPNP16150 400 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 PRKAR1BP31321 381 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 RAB38P57729 211 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 IKZF1Q13422 519 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 SEPHS2Q99611 448 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 ABCB10Q9NRK6 738 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 SEMA3GQ9NS98 782 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 V9GYQ6 96 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 LINC00862A6NCI5 91 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 HMX3A6NHT5 357 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 ARHGEF9O43307 516 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 PSKH1P11801 424 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 CKMT2P17540 419 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 DEFA1P59665 94 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 DEFA3P59666 94 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 DAB2P98082 770 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 RIN1Q13671 783 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 PLA2G2CQ5R387 149 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 ADCK1Q86TW2 530 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 DHRSXQ8N5I4 330 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 C11orf65Q8NCR3 313 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 PAPD5Q8NDF8 572 aaKnown RBP16.53■□□□□ 0.24
GDE1-203ENST00000564172 IFI44Q8TCB0 444 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 PROX1Q92786 737 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 BTBD2Q9BX70 525 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 DSN1Q9H410 356 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 TMEM38AQ9H6F2 299 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 RAB23Q9ULC3 237 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 LDB3O75112 727 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 TIPRLO75663 272 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 IL7P13232 177 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 UQCRC1P31930 480 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 RBM48Q5RL73 367 aaKnown RBP16.53■□□□□ 0.24
GDE1-203ENST00000564172 GCNT6Q5T4J0 391 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 TMEM64Q6YI46 380 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 CREB3L2Q70SY1 520 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 EID3Q8N140 333 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 LRRC25Q8N386 305 aaPredicted RBP16.53■□□□□ 0.24
GDE1-203ENST00000564172 FAM86B1Q8N7N1 296 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 OR9A2Q8NGT5 310 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 OR1L3Q8NH93 324 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 FBXO30Q8TB52 745 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 ZFAND1Q8TCF1 268 aa16.53■□□□□ 0.24
GDE1-203ENST00000564172 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.53■□□□□ 0.24
GDE1-203ENST00000564172 ZCCHC3Q9NUD5 404 aaKnown RBP16.53■□□□□ 0.24
GDE1-203ENST00000564172 SNX4O95219 450 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 SERPINA1P01009 418 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 ZNF883P0CG24 379 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 ERP29P30040 261 aaKnown RBP16.52■□□□□ 0.24
GDE1-203ENST00000564172 KDELR2P33947 212 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 RPS26P62854 115 aaKnown RBP16.52■□□□□ 0.24
GDE1-203ENST00000564172 RBBP4Q09028 425 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 FAM214AQ32MH5 1076 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 TMEM107Q6UX40 140 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 CEACAM20Q6UY09 585 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 CDH26Q8IXH8 852 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 OR4D9Q8NGE8 314 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 COL26A1Q96A83 441 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 PPWD1Q96BP3 646 aaKnown RBP16.52■□□□□ 0.24
GDE1-203ENST00000564172 TRAF4Q9BUZ4 470 aaPredicted RBP16.52■□□□□ 0.24
GDE1-203ENST00000564172 HCN3Q9P1Z3 774 aa16.52■□□□□ 0.24
GDE1-203ENST00000564172 TMEM184BQ9Y519 407 aaPredicted RBP16.52■□□□□ 0.24
GDE1-203ENST00000564172 LNP1A1A4G5 178 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 ZNF98A6NK75 572 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 H0YAE9 185 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 FGF17O60258 216 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 GPR75O95800 540 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 CPMP14384 443 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 PCGF2P35227 344 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 AVPR1BP47901 424 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 DUSP3P51452 185 aaPredicted RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 MAT1AQ00266 395 aaKnown RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 ID2Q02363 134 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 ENPP6Q6UWR7 440 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 GDPD3Q7L5L3 318 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 SZRD1Q7Z422 152 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 CBR4Q8N4T8 237 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 HORMAD2Q8N7B1 307 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 VANGL1Q8TAA9 524 aaPredicted RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 ENKURQ8TC29 256 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 MUL1Q969V5 352 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 TBC1D20Q96BZ9 403 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 ELP4Q96EB1 424 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 MMABQ96EY8 250 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms