RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 HOXB9P17482 250 aaPredicted RBP7.79□□□□□ -1.16
UBR1-204ENST00000563239 UQCRC2P22695 453 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 EVI2BP34910 448 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 PRIM2P49643 509 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 POLR2JP52435 117 aaKnown RBP7.79□□□□□ -1.16
UBR1-204ENST00000563239 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBR1-204ENST00000563239 GRAMD1BQ3KR37 738 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 SPDYE7PQ495Y7 208 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 VPS26BQ4G0F5 336 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 CCNJQ5T5M9 372 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 SAXO2Q658L1 398 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 FIGNL1Q6PIW4 674 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 ACAD11Q709F0 780 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 PACS2Q86VP3 889 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 DOLPP1Q86YN1 238 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 MIER2Q8N344 545 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 ARFGAP2Q8N6H7 521 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 COX18Q8N8Q8 333 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 OR5D16Q8NGK9 328 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 OR4C3Q8NH37 302 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 MIPOL1Q8TD10 442 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 VPS33AQ96AX1 596 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 NEURL3Q96EH8 262 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 OR7D2Q96RA2 312 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 OR52E6Q96RD3 313 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 BTBD2Q9BX70 525 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 SLC6A15Q9H2J7 730 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 NPHS2Q9NP85 383 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 QPCTLQ9NXS2 382 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 KLRF1Q9NZS2 232 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 TNFRSF10DQ9UBN6 386 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 DCTN4Q9UJW0 460 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 TINAGQ9UJW2 476 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 FBXL2Q9UKC9 423 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 SLC5A6Q9Y289 635 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 WIF1Q9Y5W5 379 aa7.79□□□□□ -1.16
UBR1-204ENST00000563239 NUP214P35658 2090 aaPredicted RBP7.79□□□□□ -1.16
UBR1-204ENST00000563239 ZNF407Q9C0G0 2248 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 TRGV8A0A0C4DH27 118 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 CCDC154A6NI56 674 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 NPIPB9F8W1W9 429 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 AQP7O14520 342 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 SCO2O43819 266 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 SUSD5O60279 629 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 HCN1O60741 890 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 AGFG2O95081 481 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 KCNH1O95259 989 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 IL6P05231 212 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 GSNP06396 782 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 NGFRP08138 427 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 TBXA2RP21731 343 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 MATN1P21941 496 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ELAVL4P26378 380 aaKnown RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 GDF1P27539 372 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 PTGS2P35354 604 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 SOAT1P35610 550 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 KRT20P35900 424 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 MDH1P40925 334 aaKnown RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 RFX3P48380 749 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 MASP1P48740 699 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 TRPC1P48995 793 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ATP4BP51164 291 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 MVDP53602 400 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 CASP9P55211 416 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 POU6F2P78424 691 aaPredicted RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 RBPJQ06330 500 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 FUT5Q11128 374 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 RCAN2Q14206 197 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.169e-6■■■■□ 24.9
UBR1-204ENST00000563239 GTDC1Q4AE62 458 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 EIPR1Q53HC9 387 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 HSP90B2PQ58FF3 399 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 AP1ARQ63HQ0 302 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 OR5M10Q6IEU7 315 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 HEPHL1Q6MZM0 1159 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ARHGAP11AQ6P4F7 1023 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 BLOC1S3Q6QNY0 202 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 OLIG3Q7RTU3 272 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 MARCH3Q86UD3 253 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 FJX1Q86VR8 437 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 PLCZ1Q86YW0 608 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 FADS6Q8N9I5 356 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 CHDHQ8NE62 594 aaPredicted RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 VPS37AQ8NEZ2 397 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 OR1J4Q8NGS1 313 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 FAM57AQ8TBR7 257 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ADAMTS15Q8TE58 950 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 JADE3Q92613 823 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 GTF2H4Q92759 462 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ZNF317Q96PQ6 595 aaPredicted RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 SDF2Q99470 211 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 ZBTB18Q99592 522 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 KLHDC3Q9BQ90 382 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 SLC35A5Q9BS91 424 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 OR2B2Q9GZK3 357 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 FGFR1OP2Q9NVK5 253 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 MRTO4Q9UKD2 239 aaKnown RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 PCDHGB4Q9UN71 923 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms