RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CPSF4O95639 269 aaKnown RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 ABCB1P08183 1280 aaPredicted RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 FBXO45P0C2W1 286 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 RFPL3SP0C7P2 107 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ZCCHC18P0CG32 403 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 CT45A8P0DMV1 189 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 CT45A9P0DMV2 189 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ELAVL4P26378 380 aaKnown RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 MAP3K8P41279 467 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 MAGEA8P43361 318 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 PRKAG1P54619 331 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 NUP107P57740 925 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 TXNL4AP83876 142 aaKnown RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 PSG6Q00889 435 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 PMPCAQ10713 525 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ZNF155Q12901 538 aaPredicted RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 ZNF791Q3KP31 576 aaPredicted RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 CYP27C1Q4G0S4 372 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 GXYLT1Q4G148 440 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 TIGD2Q4W5G0 525 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 CT45A2Q5DJT8 189 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 PRAMEF20Q5VT98 475 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 RTL6Q6ICC9 239 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ARHGAP11AQ6P4F7 1023 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 MEX3BQ6ZN04 569 aaKnown RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 SZRD1Q7Z422 152 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 PIGWQ7Z7B1 504 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ANKRD46Q86W74 232 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 GOLM1Q8NBJ4 401 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ACBD4Q8NC06 268 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 SPACA9Q96E40 222 aaPredicted RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 GIMAP5Q96F15 307 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 FAM173AQ9BQD7 235 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 ENKD1Q9H0I2 346 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 Q9N2J8 555 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 MRTO4Q9UKD2 239 aaKnown RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 FAF1Q9UNN5 650 aaPredicted RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 PCDHGB3Q9Y5G1 929 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 TEP1Q99973 2627 aaKnown RBP14.34□□□□□ -0.11
USB1-208ENST00000563207 A0A1W2PP18 115 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 DUXAA6NLW8 204 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 C9JVG2 144 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 TP53I11O14683 189 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 ABCB7O75027 752 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 NKX2-2O95096 273 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 HMGN2P05204 90 aaKnown RBP14.33□□□□□ -0.12
USB1-208ENST00000563207 ABCD3P28288 659 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 PSMD4P55036 377 aaKnown RBP14.33□□□□□ -0.12
USB1-208ENST00000563207 RPP38P78345 283 aaKnown RBP14.33□□□□□ -0.12
USB1-208ENST00000563207 TFF3Q07654 80 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 TP53BP2Q13625 1128 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 MAPRE2Q15555 327 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 NTRK2Q16620 822 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 MFSD12Q6NUT3 480 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 C6orf120Q7Z4R8 191 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 OR5M3Q8NGP4 307 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 GTF2H4Q92759 462 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 VPS33AQ96AX1 596 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 SECISBP2Q96T21 854 aaKnown RBP14.33□□□□□ -0.12
USB1-208ENST00000563207 STACQ99469 402 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 ACTRT3Q9BYD9 372 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 SH2D2AQ9NP31 389 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 SLC52A3Q9NQ40 469 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 SERHLQ9NQF3 203 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 DUSP22Q9NRW4 184 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 SACM1LQ9NTJ5 587 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 ITGB1BP2Q9UKP3 347 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 OR10H1Q9Y4A9 318 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 NINQ8N4C6 2090 aa14.33□□□□□ -0.12
USB1-208ENST00000563207 RNF103-CHMP3A0A140T963 221 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 NR5A2O00482 541 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 PPM1BO75688 479 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 TOXO94900 526 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 ANP32DO95626 131 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 FAM107AO95990 144 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 ALOX5P09917 674 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 ENDOUP21128 410 aaKnown RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 SOAT1P35610 550 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 KRT20P35900 424 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 MRPS22P82650 360 aaKnown RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 SF3A3Q12874 501 aaKnown RBP eCLIP14.32□□□□□ -0.12
USB1-208ENST00000563207 LASP1Q14847 261 aaKnown RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 EXOSC6Q5RKV6 272 aaKnown RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 CDC73Q6P1J9 531 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 ZNF585AQ6P3V2 769 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 ZNF621Q6ZSS3 439 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 TRILQ7L0X0 811 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 NUP54Q7Z3B4 507 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 SLC44A2Q8IWA5 706 aaPredicted RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 OR10G3Q8NGC4 313 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 MIPOL1Q8TD10 442 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 NEURL3Q96EH8 262 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 CCT8L2Q96SF2 557 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 TP63Q9H3D4 680 aaPredicted RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 IL1RL2Q9HB29 575 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 EQTNQ9NQ60 294 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 GPATCH2Q9NW75 528 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms