RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MC3RP41968 323 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ADAM15Q13444 863 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 PDGFRLQ15198 375 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ZNF750Q32MQ0 723 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 EIPR1Q53HC9 387 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 CLEC12AQ5QGZ9 265 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 AGBL4Q5VU57 503 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 C18orf63Q68DL7 685 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 SLC30A6Q6NXT4 461 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ZNF322Q6U7Q0 402 aaPredicted RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 SHFQ7M4L6 423 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ADGRD2Q7Z7M1 963 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 HMGN2P46Q86SG4 172 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 TMEM145Q8NBT3 493 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 OR2L3Q8NG85 312 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 GANCQ8TET4 914 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 UBASH3BQ8TF42 649 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 RNF31Q96EP0 1072 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 SLC35A4Q96G79 324 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 SECISBP2Q96T21 854 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 TTYH2Q9BSA4 534 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 MARVELD1Q9BSK0 173 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 TMED9Q9BVK6 235 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 HDHD5Q9BXW7 423 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 TBC1D17Q9HA65 648 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 MBNL1Q9NR56 388 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 IMP3Q9NV31 184 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 KLF15Q9UIH9 416 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ZNF443Q9Y2A4 671 aaPredicted RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 RWDD3Q9Y3V2 267 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 MAU2Q9Y6X3 613 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 RGS9O75916 674 aaPredicted RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 ALX3O95076 343 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 CERS1P27544 350 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 SOX18P35713 384 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ATP6V1E1P36543 226 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 CD79BP40259 229 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 AVPR1BP47901 424 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 INPP1P49441 399 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 CAV3P56539 151 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 IRF4Q15306 451 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 TRAM1Q15629 374 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 TATDN3Q17R31 274 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 FAM214AQ32MH5 1076 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ARHGAP11BQ3KRB8 267 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 EOGTQ5NDL2 527 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ZNF425Q6IV72 752 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 SYCE2Q6PIF2 218 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 MTSS1LQ765P7 747 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 TRILQ7L0X0 811 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 GET4Q7L5D6 327 aaPredicted RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 CXXC5Q7LFL8 322 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 NRMQ8IXM6 262 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 ZFP41Q8N8Y5 198 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 OR9A2Q8NGT5 310 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ZFAND1Q8TCF1 268 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 BRIX1Q8TDN6 353 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 GAL3ST3Q96A11 431 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 ZG16BQ96DA0 208 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 FYTTD1Q96QD9 318 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 PRR14Q9BWN1 585 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 PRDM9Q9NQV7 894 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 INPP5EQ9NRR6 644 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 OBP2AQ9NY56 170 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 APOBEC3BQ9UH17 382 aaKnown RBP12.23□□□□□ -0.45
USB1-207ENST00000563149 HEBP2Q9Y5Z4 205 aa12.23□□□□□ -0.45
USB1-207ENST00000563149 ANTXRLA6NF34 631 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 OTOL1A6NHN0 477 aaPredicted RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 LRRTM2O43300 516 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ARHGEF9O43307 516 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 FRS3O43559 492 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 RNF13O43567 381 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ORC5O43913 435 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 CH25HO95992 272 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 C1QBP02746 253 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 THBS1P07996 1170 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 PSKH1P11801 424 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 PAICSP22234 425 aaKnown RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 SSTR4P31391 388 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 CAPZA2P47755 286 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 RACK1P63244 317 aaKnown RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 HOXC5Q00444 222 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 FAPQ12884 760 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 TNK1Q13470 666 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 LRRC32Q14392 662 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 UAP1L1Q3KQV9 507 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 PUS10Q3MIT2 529 aaKnown RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 FRRS1Q6ZNA5 592 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 MEX3DQ86XN8 651 aaKnown RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 TRIM48Q8IWZ4 208 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ACBD7Q8N6N7 88 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ZFYVE19Q96K21 471 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ASB16Q96NS5 453 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 MS4A4EQ96PG1 132 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms