RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CCNYL3P0C7X3 344 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CT45A8P0DMV1 189 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CT45A9P0DMV2 189 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 OSMP13725 252 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 IFNA8P32881 189 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ZNF136P52737 540 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 UGT2B15P54855 530 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 TAS2R41P59536 307 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 COX10Q12887 443 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ILKQ13418 452 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 TRAM2Q15035 370 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CT45A2Q5DJT8 189 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ENTPD8Q5MY95 495 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 BROXQ5VW32 411 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 C1orf94Q6P1W5 598 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 BMP8AQ7Z5Y6 402 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ZAR1Q86SH2 424 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ENTHD1Q8IYW4 607 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 OR4K5Q8NGD3 323 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CNIH3Q8TBE1 160 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 SLC38A4Q969I6 547 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 YIPF2Q9BWQ6 316 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 TGIF2Q9GZN2 237 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ARMC7Q9H6L4 198 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 Q9N2J8 555 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 PCDH15Q96QU1 1955 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 IGLV3-12A0A075B6K2 115 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 ZAR1LA6NP61 321 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 NPIPB9F8W1W9 429 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 NTN3O00634 580 aaPredicted RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 ABCB7O75027 752 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 WBP4O75554 376 aaKnown RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 IGKV3-11P04433 115 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 ZNF883P0CG24 379 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 POU2F1P14859 743 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 TNNI3P19429 210 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 CHMP24386 653 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 PGDP52209 483 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 EFNA3P52797 238 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 CRISP1P54107 249 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 SLC37A1P57057 533 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 CSNK2BP67870 215 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 ALDH6A1Q02252 535 aaKnown RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 PTGES3Q15185 160 aaKnown RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 FLYWCH1Q4VC44 716 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 Q6ZPB1 254 aaPredicted RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 COX15Q7KZN9 410 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 B3GNT8Q7Z7M8 397 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 GRAMD2AQ8IUY3 354 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 SLITRK4Q8IW52 837 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 DEPDC4Q8N2C3 294 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 RHOXF1Q8NHV9 184 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 TSLPQ969D9 159 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 DGCR14Q96DF8 476 aaKnown RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 SENP5Q96HI0 755 aaPredicted RBP11.96□□□□□ -0.49
SNX1-211ENST00000560829 LOXL4Q96JB6 756 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 CCDC74BQ96LY2 380 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 MCHR1Q99705 422 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 G6PC3Q9BUM1 346 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 SEMA4GQ9NTN9 838 aa11.96□□□□□ -0.49
SNX1-211ENST00000560829 ARID1BQ8NFD5 2236 aaPredicted RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 A0A087WUU8 490 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 CPSF4LA6NMK7 179 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 DYRK3O43781 588 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 OR6B1O95007 311 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ONECUT2O95948 504 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 IGKV1D-16P01601 117 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 JUNBP17275 347 aaPredicted RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 DAB2P98082 770 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ZNF141Q15928 474 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNX1-211ENST00000560829 ZSWIM7Q19AV6 140 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 MINDY4Q4G0A6 757 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 VWA2Q5GFL6 755 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 MRPL2Q5T653 305 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 C1orf189Q5VU69 101 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 LAIR1Q6GTX8 287 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 DBX2Q6ZNG2 339 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PLEKHM3Q6ZWE6 761 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ZER1Q7Z7L7 766 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 RANBP3LQ86VV4 465 aaPredicted RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 TMEM151BQ8IW70 566 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ZSCAN1Q8NBB4 408 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 RCBTB1Q8NDN9 531 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PLPP5Q8NEB5 264 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 OR4N2Q8NGD1 307 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 APH1BQ8WW43 257 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 OIT3Q8WWZ8 545 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 SLC35B4Q969S0 331 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 SLC46A1Q96NT5 459 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 OR6C1Q96RD1 312 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PRR14Q9BWN1 585 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ITPAQ9BY32 194 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 DUSP21Q9H596 190 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 SLC22A11Q9NSA0 550 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 RARRES3Q9UL19 164 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 RNF6Q9Y252 685 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms