RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754		H0YC42	278 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	ARHGEF9	O43307	516 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	COQ9	O75208	318 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	HK1	P19367	917 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	UGT2B10	P36537	528 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	NCBP2	P52298	156 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	FOXA1	P55317	472 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	TPD52	P55327	224 aa	Predicted RBP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	CLDN20	P56880	219 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	NAA20	P61599	178 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	PRR5	P85299	388 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	ZNF763	Q0D2J5	394 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	C17orf67	Q0P5P2	114 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	KIAA0040	Q15053	153 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	DECR1	Q16698	335 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	PRSS57	Q6UWY2	283 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	C22orf34	Q6ZV56	151 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	SH2D5	Q6ZV89	423 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	P4HA3	Q7Z4N8	544 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	MEIOB	Q8N635	442 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	ZNF610	Q8N9Z0	462 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	MNS1	Q8NEH6	495 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	MZB1	Q8WU39	189 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	HOXB13	Q92826	284 aa	Predicted RBP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	CCDC126	Q96EE4	140 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	C1GALT1C1	Q96EU7	318 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	METTL2A	Q96IZ6	378 aa	Known RBP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	AMDHD1	Q96NU7	426 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	SLC39A3	Q9BRY0	314 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	LMF2	Q9BU23	707 aa	Known RBP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	EBPL	Q9BY08	206 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	PTGES2	Q9H7Z7	377 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	MID1IP1	Q9NPA3	183 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	PLSCR4	Q9NRQ2	329 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	ZNF226	Q9NYT6	803 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	FLRT3	Q9NZU0	649 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	SENP1	Q9P0U3	644 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	AP4B1	Q9Y6B7	739 aa		12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	NUP214	P35658	2090 aa	Predicted RBP	12.29	□□□□□ -0.44
RNF31-223	ENST00000560754	TTC36	A6NLP5	189 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754		G3V2L1	256 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	C16orf97	H3BN30	126 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754		H3BQF6	201 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	RIPK2	O43353	540 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	SCO2	O43819	266 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	IL11	P20809	199 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	LOX	P28300	417 aa	Predicted RBP	12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	FGFBP1	Q14512	234 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	ACKR1	Q16570	336 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	SPDYA	Q5MJ70	313 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	NOXRED1	Q6NXP6	359 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	APOOL	Q6UXV4	268 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	MARCH3	Q86UD3	253 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	UBQLNL	Q8IYU4	475 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	CNEP1R1	Q8N9A8	125 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	PIGQ	Q9BRB3	760 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	PINK1	Q9BXM7	581 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	TXLNGY	Q9BZA5	131 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	KLHL28	Q9NXS3	571 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	MRTO4	Q9UKD2	239 aa	Known RBP	12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	EMCN	Q9ULC0	261 aa		12.28	□□□□□ -0.44
RNF31-223	ENST00000560754	COL6A5	A8TX70	2615 aa		12.27	□□□□□ -0.44
RNF31-223	ENST00000560754	NPIPB8	E9PQR5	432 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	GOLGA8R	I6L899	631 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	PYGB	P11216	843 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	FPR1	P21462	350 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	TBXA2R	P21731	343 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	TCEA1	P23193	301 aa	Known RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	PRPH2	P23942	346 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	ADSL	P30566	484 aa	Predicted RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	CPOX	P36551	454 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	CLK3	P49761	638 aa	Known RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	PSMD4	P55036	377 aa	Known RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	SLC29A2	Q14542	456 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	SH2D4B	Q5SQS7	431 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	RAET1L	Q5VY80	246 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	TMEM107	Q6UX40	140 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	IKBIP	Q70UQ0	350 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	METTL25	Q8N6Q8	603 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	FNDC9	Q8TBE3	224 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	IGFBPL1	Q8WX77	278 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	ZNF592	Q92610	1267 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	ZNF764	Q96H86	408 aa	Predicted RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	ZNF845	Q96IR2	970 aa	Predicted RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	EGLN2	Q96KS0	407 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	C16orf45	Q96MC5	204 aa	Predicted RBP	12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	FAM111A	Q96PZ2	611 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	MED18	Q9BUE0	208 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754		Q9N2J8	555 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	NTM	Q9P121	344 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	FREM1	Q5H8C1	2179 aa		12.27	□□□□□ -0.45
RNF31-223	ENST00000560754	HIVEP2	P31629	2446 aa		12.26	□□□□□ -0.45
RNF31-223	ENST00000560754	FAM171A2	A8MVW0	826 aa		12.26	□□□□□ -0.45
RNF31-223	ENST00000560754	SMPD2	O60906	423 aa		12.26	□□□□□ -0.45
RNF31-223	ENST00000560754	RSL1D1	O76021	490 aa	Known RBP	12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms