RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DHX33Q9H6R0 707 aaKnown RBP3.05□□□□□ -1.92
SPG11-218ENST00000559754 KCNK13Q9HB14 408 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 PRR34Q9NV39 138 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 UTP6Q9NYH9 597 aaKnown RBP3.05□□□□□ -1.92
SPG11-218ENST00000559754 SEC14L3Q9UDX4 400 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 CDH9Q9ULB4 789 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 KIAA1257Q9ULG3 409 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 RPH3ALQ9UNE2 315 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 AGRNO00468 2067 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 MYH15Q9Y2K3 1946 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 PNPLA6Q8IY17 1366 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TNIKQ9UKE5 1360 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 HEATR9A2RTY3 570 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 ARHGEF35A5YM69 484 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 LRRC30A6NM36 301 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 BTN3A3O00478 584 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 FPGTO14772 594 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SH2D1BO14796 132 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 ALOX15BO15296 676 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 CFLARO15519 480 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TSPAN2O60636 221 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 IGHV3-13P01766 116 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 KRT14P02533 472 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 RALBP11234 206 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TSPAN8P19075 237 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 MAT2AP31153 395 aaKnown RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 RFC2P35250 354 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 FHITP49789 147 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 DCDC1P59894 354 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 HAND2P61296 217 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 RPS4XP62701 263 aaKnown RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 MRPS6P82932 125 aaKnown RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 SRYQ05066 204 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 PAX8Q06710 450 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SPAG1Q07617 926 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 ELAVL3Q14576 367 aaKnown RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 GANABQ14697 944 aaKnown RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 CAMK4Q16566 473 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 DUSP5Q16690 384 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 DMKNQ6E0U4 476 aaPredicted RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 CLEC2AQ6UVW9 174 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TMEM184AQ6ZMB5 413 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 NLRP9Q7RTR0 991 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 DPY19L4Q7Z388 723 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 NET1Q7Z628 596 aaPredicted RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 ITIH5Q86UX2 942 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 PARGQ86W56 976 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 ECHDC2Q86YB7 292 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 WDR49Q8IV35 697 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 LINC00518Q8N0U6 118 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SLC39A11Q8N1S5 342 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SLC37A3Q8NCC5 494 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 OR1L3Q8NH93 324 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 GPR148Q8TDV2 347 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 RAPGEF5Q92565 580 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 PNPLA2Q96AD5 504 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 C11orf24Q96F05 449 aaPredicted RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 ZNF486Q96H40 463 aaPredicted RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 PCED1BQ96HM7 432 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TGM7Q96PF1 710 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 NEDD4LQ96PU5 975 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 CHP1Q99653 195 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 LPAR4Q99677 370 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 CHRDL1Q9BU40 450 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 STMN4Q9H169 189 aaPredicted RBP3.04□□□□□ -1.92
SPG11-218ENST00000559754 ZFP14Q9HCL3 533 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 MED17Q9NVC6 651 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SMOXQ9NWM0 555 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 NDE1Q9NXR1 346 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 NLGN3Q9NZ94 848 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 HACD3Q9P035 362 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 ONECUT1Q9UBC0 465 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TUBGCP4Q9UGJ1 667 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SUN2Q9UH99 717 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 POMT2Q9UKY4 750 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 CFAP45Q9UL16 551 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 FZR1Q9UM11 496 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 PIGLQ9Y2B2 252 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 GSTK1Q9Y2Q3 226 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 SLC6A5Q9Y345 797 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 FKBP7Q9Y680 259 aa3.04□□□□□ -1.92
SPG11-218ENST00000559754 TDRD15B5MCY1 1934 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 A0A087WUV0 522 aaPredicted RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 A0A087WZ39 114 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 A0A1W2PNV4 684 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TTC26A0AVF1 554 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 FBLL1A6NHQ2 334 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 SNTNA6NMZ2 147 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 MEI4A8MW99 385 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 SNURFLB1AK76 121 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TCP11X1B4DZS4 312 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TCP10L2B9ZVM9 353 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 H0YL77 283 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 STX7O15400 261 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 KIAA0513O60268 411 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TPST2O60704 377 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 MTRF1O75570 445 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 OPN1LWP04000 364 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 ALPIP09923 528 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms