RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 SPATA5L1Q9BVQ7 753 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 ARMC7Q9H6L4 198 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 KAT8Q9H7Z6 458 aaKnown RBP8.5□□□□□ -1.05
LDLR-210ENST00000559340 METTL7AQ9H8H3 244 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 A4GALTQ9NPC4 353 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 SPAG4Q9NPE6 437 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 UBQLN4Q9NRR5 601 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 SACM1LQ9NTJ5 587 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 PLA2G3Q9NZ20 509 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 ADA2Q9NZK5 511 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
LDLR-210ENST00000559340 ABCG2Q9UNQ0 655 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 ZNF232Q9UNY5 417 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 ANGPT4Q9Y264 503 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 WDR45Q9Y484 360 aa8.5□□□□□ -1.05
LDLR-210ENST00000559340 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 COL6A6A6NMZ7 2263 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 IGSF10Q6WRI0 2623 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ANKRD33BA6NCL7 494 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 FXYD1O00168 92 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SCDO00767 359 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 GSTA4O15217 222 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 GYG2O15488 501 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 NME6O75414 186 aaPredicted RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 TNFRSF21O75509 655 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SERPINB7O75635 380 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SLC25A12O75746 678 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SNX4O95219 450 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 STAMBPO95630 424 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 IFNA14P01570 189 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SP1P08047 785 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 NGFRP08138 427 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 TFPTP0C1Z6 253 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ARAFP10398 606 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 CYP4B1P13584 511 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 CNR1P21554 472 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 TBXA2RP21731 343 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 TNFSF10P50591 281 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 MVDP53602 400 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ATP12AP54707 1039 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 CASP9P55211 416 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 FBXW4P57775 412 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 MTPNP58546 118 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 CDK6Q00534 326 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 BNIP1Q12981 228 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SCARB2Q14108 478 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 VEZF1Q14119 521 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 FLYWCH1Q4VC44 716 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ZNF766Q5HY98 468 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SAMD4BQ5PRF9 694 aaKnown RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 AP1ARQ63HQ0 302 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 FIGNL1Q6PIW4 674 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 NET1Q7Z628 596 aaPredicted RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 PACS2Q86VP3 889 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ZGRF1Q86YA3 2104 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 MISPQ8IVT2 679 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SLC15A3Q8IY34 581 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 PEX5LQ8IYB4 626 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 DEFB107AQ8IZN7 70 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ZNF619Q8N2I2 560 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 FBXW8Q8N3Y1 598 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 TEX19Q8NA77 164 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 POGLUT1Q8NBL1 392 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 HIPK4Q8NE63 616 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 BHLHE22Q8NFJ8 381 aaPredicted RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 OR4N2Q8NGD1 307 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 BBS10Q8TAM1 723 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SPPL2AQ8TCT8 520 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 PAQR8Q8TEZ7 354 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 EFHD2Q96C19 240 aaPredicted RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 REXO5Q96IC2 774 aaKnown RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 CDRT15Q96T59 188 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 TBL1XR1Q9BZK7 514 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SAP130Q9H0E3 1048 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SLC25A18Q9H1K4 315 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 SERHL2Q9H4I8 314 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 BCL2L10Q9HD36 194 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 SUCOQ9UBS9 1254 aaKnown RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 PRPF19Q9UMS4 504 aaKnown RBP8.49□□□□□ -1.05
LDLR-210ENST00000559340 TP53TG5Q9Y2B4 290 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 IFT52Q9Y366 437 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 PCDHGA10Q9Y5H3 936 aa8.49□□□□□ -1.05
LDLR-210ENST00000559340 A0A1W2PQD3 144 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 ELOVL7A1L3X0 281 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 PRAMEF25A6NGN4 478 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 FAM220BPB1ANY3 271 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 MAN1A2O60476 641 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 UGT2B11O75310 529 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 UTS2O95399 124 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 H6PDO95479 791 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 BCHEP06276 602 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 DBIP07108 87 aaKnown RBP8.48□□□□□ -1.05
LDLR-210ENST00000559340 FAM87AP0C7U9 286 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 T-ENOLP0DO92 83 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 ETS2P15036 469 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 PCGF2P35227 344 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 DCTP40126 519 aa8.48□□□□□ -1.05
LDLR-210ENST00000559340 SLC7A2P52569 658 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms