RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ADSLP30566 484 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 CASRP41180 1078 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 KHKP50053 298 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 PNLIPRP2P54317 469 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 NRG3P56975 720 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 POU6F2P78424 691 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 LRRC74AQ0VAA2 488 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 NFYCQ13952 458 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 RGNQ15493 299 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ZNHIT3Q15649 155 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 CD226Q15762 336 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ADRM1Q16186 407 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 MAPK14Q16539 360 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM1-217ENST00000559108 TRMT5Q32P41 509 aaKnown RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 NDUFAF6Q330K2 333 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 RPS26P11Q5JNZ5 115 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 SLC22A10Q63ZE4 541 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 FAM91A1Q658Y4 838 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ZNF324BQ6AW86 544 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 TYW3Q6IPR3 259 aaKnown RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 C8orf82Q6P1X6 216 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 ANGPTL8Q6UXH0 198 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 FRRS1Q6ZNA5 592 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 NUP54Q7Z3B4 507 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 SIAH3Q8IW03 269 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 CHERPQ8IWX8 916 aaKnown RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 WDSUB1Q8N9V3 476 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ADAMTS15Q8TE58 950 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 C5orf34Q96MH7 638 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ANKRD27Q96NW4 1050 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 CGREF1Q99674 301 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ANGPTL4Q9BY76 406 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ZNF350Q9GZX5 532 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 TIMMDC1Q9NPL8 285 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ASF1BQ9NVP2 202 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 FAF1Q9UNN5 650 aaPredicted RBP9.97□□□□□ -0.81
TPM1-217ENST00000559108 PCDHGB6Q9Y5F9 930 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 ZNF462Q96JM2 2506 aa9.97□□□□□ -0.81
TPM1-217ENST00000559108 PRAMEF25A6NGN4 478 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 ASNA1O43681 348 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 SCO2O43819 266 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 KCNH1O95259 989 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 ANP32DO95626 131 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 OXSR1O95747 527 aaPredicted RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 TFPTP0C1Z6 253 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 T-ENOLP0DO92 83 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 GPX2P18283 190 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 SLC6A2P23975 617 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 IL12BP29460 328 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 EVI2BP34910 448 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 TDGF1P3P51864 188 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 FOXK1P85037 733 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 CHRNEQ04844 493 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 CYLC2Q14093 348 aaPredicted RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 DECR1Q16698 335 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 ARHGAP11BQ3KRB8 267 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 COQ5Q5HYK3 327 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 NANOGP8Q6NSW7 305 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 RPUSD3Q6P087 351 aaKnown RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 TMEM81Q6P7N7 255 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 FGD2Q7Z6J4 655 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 MARCH3Q86UD3 253 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 COMTD1Q86VU5 262 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 PTOV1Q86YD1 416 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 GATSQ8NAP1 163 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 ZFP62Q8NB50 900 aaPredicted RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 CCDC197Q8NCU1 140 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 RP9Q8TA86 221 aaKnown RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 SLC38A5Q8WUX1 472 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 XAGE5Q8WWM1 108 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 ROPN1LQ96C74 230 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 LRRC58Q96CX6 371 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 SGCZQ96LD1 299 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 GPATCH1Q9BRR8 931 aaKnown RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 TTTY12Q9BZ98 90 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 SLC38A1Q9H2H9 487 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 NANOGQ9H9S0 305 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 SACM1LQ9NTJ5 587 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.96□□□□□ -0.82
TPM1-217ENST00000559108 MKLN1Q9UL63 735 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 CHST2Q9Y4C5 530 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 LIPGQ9Y5X9 500 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 SVILO95425 2214 aa9.96□□□□□ -0.82
TPM1-217ENST00000559108 KIAA1549Q9HCM3 1950 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 ANKRD33BA6NCL7 494 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 TTC36A6NLP5 189 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 CLDN24A6NM45 220 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 FAM166BA8MTA8 275 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 B8ZZF3 427 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 CDK2AP1O14519 115 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 AIM2O14862 343 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 KIAA0513O60268 411 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 ADAM11O75078 769 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 GCM2O75603 506 aaPredicted RBP9.95□□□□□ -0.82
TPM1-217ENST00000559108 UGT2B17O75795 530 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 H6PDO95479 791 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 CBX6O95503 412 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 CNR1P21554 472 aa9.95□□□□□ -0.82
TPM1-217ENST00000559108 CRATP43155 626 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms