RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 C7orf57Q8NEG2 295 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 OR52R1Q8NGF1 315 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 SPPL2AQ8TCT8 520 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 KAT2AQ92830 837 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 EXOSC8Q96B26 276 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 C14orf79Q96F83 325 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 TRIB1Q96RU8 372 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 MRPL57Q9BQC6 102 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 RHOXF2Q9BQY4 288 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 NTMT1Q9BV86 223 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 FAIM2Q9BWQ8 316 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 ENKD1Q9H0I2 346 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 TSPYL1Q9H0U9 437 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 NXF5Q9H1B4 397 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 ANKRA2Q9H9E1 313 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 PROK2Q9HC23 129 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 GALNT9Q9HCQ5 603 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 SH2D2AQ9NP31 389 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 KLRF1Q9NZS2 232 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 TMEM216Q9P0N5 145 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 SENP1Q9P0U3 644 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 TBK1Q9UHD2 729 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 TMCO1Q9UM00 188 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 MAPRE3Q9UPY8 281 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 PCDHA9Q9Y5H5 950 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 A0A1B0GVC2 190 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 C1orf226A1L170 272 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 SMIM23A6NLE4 172 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 EEF1E1-BLOC1S5C9J1V9 151 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 MANBAO00462 879 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 EEF1E1O43324 174 aaKnown RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 PCDH7O60245 1069 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 DLX3O60479 287 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 REM1O75628 298 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 KCNH1O95259 989 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 KRT6AP02538 564 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 KRT6BP04259 564 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 IL3P08700 152 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 COL6A2P12110 1019 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 GABRA1P14867 456 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 CSNK2A2P19784 350 aaPredicted RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 ABCD3P28288 659 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 ECHS1P30084 290 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 MAGEA12P43365 314 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 KRT6CP48668 564 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 HTR6P50406 440 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 ARFIP1P53367 373 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 RPP38P78345 283 aaKnown RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 HMGCS1Q01581 520 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 DUSP2Q05923 314 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 TFF3Q07654 80 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 GALNT1Q10472 559 aaPredicted RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 FUT7Q11130 342 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 TBL3Q12788 808 aaKnown RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 HYAL4Q2M3T9 481 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 ACSF3Q4G176 576 aaPredicted RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 TRMT12Q53H54 448 aaKnown RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 UNC50Q53HI1 259 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 SH2D4BQ5SQS7 431 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 DCST1Q5T197 706 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 LGSNQ5TDP6 509 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 CES4AQ5XG92 561 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 SLC48A1Q6P1K1 146 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 METTL2BQ6P1Q9 378 aaKnown RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 PLXDC2Q6UX71 529 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 GPRIN3Q6ZVF9 776 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 DND1Q8IYX4 353 aaKnown RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 LRRC25Q8N386 305 aaPredicted RBP6.68□□□□□ -1.34
SPG11-213ENST00000558988 ZNF615Q8N8J6 731 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 ZNF441Q8N8Z8 693 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 TNIP2Q8NFZ5 429 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 OR1J4Q8NGS1 313 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 OR14L1PQ8NHC6 308 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 METTL6Q8TCB7 284 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 ADIPOR1Q96A54 375 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 OMA1Q96E52 524 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 TMEM237Q96Q45 408 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 KCNA7Q96RP8 456 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 SERHLQ9NQF3 203 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 NMRK1Q9NWW6 199 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 MAT2BQ9NZL9 334 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 TRPS1Q9UHF7 1281 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 UTS2RQ9UKP6 389 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 PSME2Q9UL46 239 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 OAZ3Q9UMX2 235 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 C15orf41Q9Y2V0 281 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 PLLPQ9Y342 182 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 TIMM22Q9Y584 194 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 ZNF780BQ9Y6R6 833 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 CRYBG3Q68DQ2 2970 aa6.68□□□□□ -1.34
SPG11-213ENST00000558988 CELSR2Q9HCU4 2923 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 F8P00451 2351 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 MED12Q93074 2177 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 ANKRD34BA5PLL1 514 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 HSPB2A8KAH6 182 aa6.67□□□□□ -1.34
SPG11-213ENST00000558988 FAM47E-STBD1D6RA91 191 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms