RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 TRPC1P48995 793 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 CLK3P49761 638 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 ANXA11P50995 505 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 TXNL4AP83876 142 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 DCST2Q5T1A1 773 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 FNDC7Q5VTL7 733 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 FIGNL1Q6PIW4 674 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 GALNT10Q86SR1 603 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 OR52N2Q8NGI0 321 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 OR1J4Q8NGS1 313 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 FAM110BQ8TC76 370 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 DTNBP1Q96EV8 351 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 TBL1XR1Q9BZK7 514 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 OR51I1Q9H343 314 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 EXD2Q9NVH0 621 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 C15orf41Q9Y2V0 281 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 HEATR5AQ86XA9 2040 aa17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 PHF3Q92576 2039 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-208ENST00000558954 TENM4Q6N022 2769 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 SCO2O43819 266 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 KRT75O95678 551 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 GSNP06396 782 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 NGFRP08138 427 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 CCNJQ5T5M9 372 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 ATAD3BQ5T9A4 648 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 TIGD3Q6B0B8 471 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 ARHGAP11AQ6P4F7 1023 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 TNFAIP8L2Q6P589 184 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 C16orf62Q7Z3J2 963 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 PRR7Q8TB68 274 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 GTF2H4Q92759 462 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 NSRP1Q9H0G5 558 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 SDHAF3Q9NRP4 125 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 PLSCR2Q9NRY7 297 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 FLNCQ14315 2725 aa17.25■□□□□ 0.35
RABGGTA-208ENST00000558954 GNB5O14775 395 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 FADS1O60427 444 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 RFPL3SP0C7P2 107 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 CAPN3P20807 821 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 PTPN6P29350 595 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 LSP1P33241 339 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 KCNC4Q03721 635 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 SF3A3Q12874 501 aaKnown RBP eCLIP17.24■□□□□ 0.357e-7■□□□□ 9.8
RABGGTA-208ENST00000558954 SLC2A7Q6PXP3 512 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 RNF130Q86XS8 419 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 C10orf82Q8WW14 230 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 PHF12Q96QT6 1004 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 DEFB127Q9H1M4 99 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 UBQLN3Q9H347 655 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 HHATLQ9HCP6 504 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 SLC6A13Q9NSD5 602 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 FLRT3Q9NZU0 649 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 PPP4R1LQ9P1A2 415 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 KCNE3Q9Y6H6 103 aa17.24■□□□□ 0.35
RABGGTA-208ENST00000558954 MED12Q93074 2177 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 A0A096LPI6 279 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 C2orf72A6NCS6 295 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 SLC19A2O60779 497 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 WISP2O76076 250 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 OXSR1O95747 527 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 IGHG3P01860 377 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 HPGDP15428 266 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 ABOP16442 354 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 TBXA2RP21731 343 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 MAGEA8P43361 318 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 GAS1P54826 345 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 CASP9P55211 416 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 HSF1Q00613 529 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 SLC10A1Q14973 349 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 EIF2S3LQ2VIR3 472 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 ZAR1Q86SH2 424 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 CHDHQ8NE62 594 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 ZFP90Q8TF47 636 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 TSPEARQ8WU66 669 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 GNRHR2Q96P88 292 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 LDAHQ9H6V9 325 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 UBQLN4Q9NRR5 601 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 FBXO34Q9NWN3 711 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 OSGIN2Q9Y236 505 aa17.23■□□□□ 0.35
RABGGTA-208ENST00000558954 A0A1W2PP18 115 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 SCDO00767 359 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 SUSD5O60279 629 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 HCN1O60741 890 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 PDE9AO76083 593 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 CELA3AP09093 270 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 OR12D1P0DN82 309 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 GYS2P54840 703 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 CASP6P55212 293 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 HPCAP84074 193 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 STX5Q13190 355 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 TOMM20Q15388 145 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 ARHGAP11BQ3KRB8 267 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 FLYWCH1Q4VC44 716 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 HEPHL1Q6MZM0 1159 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 PLCZ1Q86YW0 608 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 WDSUB1Q8N9V3 476 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 ZNF527Q8NB42 609 aa17.22■□□□□ 0.35
RABGGTA-208ENST00000558954 PNPT1Q8TCS8 783 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms