RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 KRT20P35900 424 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 RFX3P48380 749 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 SLC18A2Q05940 514 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 FAM27E3Q08E93 113 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 ZNF474Q6S9Z5 364 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 BTLAQ7Z6A9 289 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 TDRPQ86YL5 185 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 GRAMD2AQ8IUY3 354 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 SAMD14Q8IZD0 417 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 OR4K17Q8NGC6 315 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 UBLCP1Q8WVY7 318 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 HOXB13Q92826 284 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 STARD4Q96DR4 205 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 TSSK3Q96PN8 268 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 PIGQQ9BRB3 760 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 MECRQ9BV79 373 aa12.22□□□□□ -0.45
VPS18-203ENST00000558855 STMN4Q9H169 189 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 OPN3Q9H1Y3 402 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 DDX18Q9NVP1 670 aaKnown RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 FOXD3Q9UJU5 478 aaPredicted RBP12.22□□□□□ -0.45
VPS18-203ENST00000558855 SH3D21A4FU49 640 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 SEC14L5O43304 696 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 SEC22BO75396 215 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 LINC00032P0C843 101 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 UROSP10746 265 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 KRT4P19013 534 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 NTSP30990 170 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 CPOXP36551 454 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 KIR2DL2P43627 348 aaPredicted RBP12.21□□□□□ -0.45
VPS18-203ENST00000558855 GSTM5P46439 218 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 SLC6A8P48029 635 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 DSCR4P56555 118 aaPredicted RBP12.21□□□□□ -0.45
VPS18-203ENST00000558855 SIRPAP78324 504 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 ADAM8P78325 824 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 PDE7AQ13946 482 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 TMEM44Q2T9K0 475 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 RFTN2Q52LD8 501 aaPredicted RBP12.21□□□□□ -0.45
VPS18-203ENST00000558855 RAET1LQ5VY80 246 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 GGNQ86UU5 652 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 GATSQ8NAP1 163 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 WFDC11Q8NEX6 87 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 FNDC9Q8TBE3 224 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 DUSP19Q8WTR2 217 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 C1GALT1C1Q96EU7 318 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 POM121Q96HA1 1249 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 TM9SF2Q99805 663 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 LRTM1Q9HBL6 345 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 SIRT3Q9NTG7 399 aaPredicted RBP12.21□□□□□ -0.45
VPS18-203ENST00000558855 FAM120CQ9NX05 1096 aaKnown RBP12.21□□□□□ -0.45
VPS18-203ENST00000558855 SLC17A7Q9P2U7 560 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 GRID1Q9ULK0 1009 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 TESMINQ9Y4I5 508 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
VPS18-203ENST00000558855 H3BML4 177 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 LSM1O15116 133 aaKnown RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 PDPK1O15530 556 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 AQP8O94778 261 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CGAP01215 116 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CREB1P16220 341 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CD53P19397 219 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 DNASE1P24855 282 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 ALDH3A1P30838 453 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 GABRA3P34903 492 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 FRKP42685 505 aaPredicted RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 RNF144AP50876 292 aaPredicted RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 RPL38P63173 70 aaKnown RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 MRPS22P82650 360 aaKnown RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS18-203ENST00000558855 GUSBP1Q15486 140 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 UGT3A2Q3SY77 523 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CCDC153Q494R4 210 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CYP27C1Q4G0S4 372 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 EXOSC6Q5RKV6 272 aaKnown RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 LIPMQ5VYY2 423 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 KANK2Q63ZY3 851 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 AAGABQ6PD74 315 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 ZCCHC23Q6ZST2 131 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CCDC63Q8NA47 563 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 SLC16A11Q8NCK7 471 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 OR4C3Q8NH37 302 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 GOT1L1Q8NHS2 421 aaPredicted RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 FAM76AQ8TAV0 307 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 SMPDL3BQ92485 455 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 SLC9A6Q92581 669 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 ZNF524Q96C55 264 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 CCDC126Q96EE4 140 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 ZFP3Q96NJ6 502 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 SMR3AQ99954 134 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 PINK1Q9BXM7 581 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 C1orf109Q9NX04 203 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 C6orf203Q9P0P8 240 aaPredicted RBP12.2□□□□□ -0.46
VPS18-203ENST00000558855 PACSIN3Q9UKS6 424 aa12.2□□□□□ -0.46
VPS18-203ENST00000558855 NIPBLQ6KC79 2804 aaeCLIP12.19□□□□□ -0.46
VPS18-203ENST00000558855 IGLV3-32A0A0A0MS00 114 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CCDC151A5D8V7 595 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 SLC22A20A6NK97 555 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms