RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	QPCTL	Q9NXS2	382 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	TMEM216	Q9P0N5	145 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF639	Q9UID6	485 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	ADAM29	Q9UKF5	820 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	TMCO1	Q9UM00	188 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	MAPRE3	Q9UPY8	281 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	C15orf41	Q9Y2V0	281 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	PLLP	Q9Y342	182 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	VPS13C	Q709C8	3753 aa		6.37	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF469	Q96JG9	3925 aa	Predicted RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ABCA4	P78363	2273 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TMEM120B	A0PK00	339 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	C1orf226	A1L170	272 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	HSPB2	A8KAH6	182 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	AHRR	A9YTQ3	701 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787		H3BQF6	201 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	SYT5	O00445	386 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	DIAPH2	O60879	1101 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	UGT2B11	O75310	529 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	SPAG7	O75391	227 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	SUPT7L	O94864	414 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ATP1B1	P05026	303 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	HPN	P05981	417 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	IL3	P08700	152 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CREB1	P16220	341 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TAC1	P20366	129 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CFP	P27918	469 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	PTPN6	P29350	595 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CEACAM8	P31997	349 aa	Predicted RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	PTGDS	P41222	190 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	STAR	P49675	285 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF136	P52737	540 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	IST1	P53990	364 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	NRG3	P56975	720 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CORO7	P57737	925 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	HMGCS1	Q01581	520 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	SRY	Q05066	204 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	FOXF2	Q12947	444 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	HSPB2	Q16082	182 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	PRSS53	Q2L4Q9	553 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	GGTA1P	Q4G0N0	100 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF678	Q5SXM1	525 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	C6orf163	Q5TEZ5	329 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	OR5M10	Q6IEU7	315 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	SPNS3	Q6ZMD2	512 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	GPRIN3	Q6ZVF9	776 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	NUP54	Q7Z3B4	507 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	MRPL41	Q8IXM3	137 aa	Known RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	WDSUB1	Q8N9V3	476 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	C9orf106	Q8NAJ2	232 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	FAM83F	Q8NEG4	500 aa	Predicted RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	OR1J4	Q8NGS1	313 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	OR9A2	Q8NGT5	310 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ABHD4	Q8TB40	342 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	METTL6	Q8TCB7	284 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TCP10L	Q8TDR4	215 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	HGD	Q93099	445 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ABTB1	Q969K4	478 aa	Predicted RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TMBIM1	Q969X1	311 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	EXOSC8	Q96B26	276 aa	Known RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CTHRC1	Q96CG8	243 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	NTNG2	Q96CW9	530 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CCDC126	Q96EE4	140 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	APIP	Q96GX9	242 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	LCOR	Q96JN0	433 aa	Predicted RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TMEM237	Q96Q45	408 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	DIRC2	Q96SL1	478 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	EBPL	Q9BY08	206 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	POLDIP3	Q9BY77	421 aa	Known RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ACPT	Q9BZG2	426 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	BRF2	Q9HAW0	419 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	PFDN4	Q9NQP4	134 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	VPS29	Q9UBQ0	182 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TRPS1	Q9UHF7	1281 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	UTS2R	Q9UKP6	389 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	PSME2	Q9UL46	239 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	SNX6	Q9UNH7	406 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	DLGAP4	Q9Y2H0	992 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	TIMM22	Q9Y584	194 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF780B	Q9Y6R6	833 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	MPDZ	O75970	2070 aa		6.36	□□□□□ -1.39
MARK3-215	ENST00000558787	ARHGAP21	Q5T5U3	1957 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	GNG14	A0A1W2PPG7	69 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	PRAMEF25	A6NGN4	478 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787		B4DXG7	233 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	EEF1E1-BLOC1S5	C9J1V9	151 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	UBFD1	O14562	309 aa	Known RBP	6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	DVL2	O14641	736 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	BIRC5	O15392	142 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	EEF1E1	O43324	174 aa	Known RBP	6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	PCDH7	O60245	1069 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	PLIN3	O60664	434 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	GUCY1B2	O75343	617 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	ULK1	O75385	1050 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	REM1	O75628	298 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	MYL2	P10916	166 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	NAGA	P17050	411 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	DRD5	P21918	477 aa		6.35	□□□□□ -1.39
MARK3-215	ENST00000558787	HMOX2	P30519	316 aa		6.35	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms