RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TRIM8Q9BZR9 551 aa16■□□□□ 0.15
TPM1-214ENST00000558544 RAD21L1Q9H4I0 556 aa16■□□□□ 0.15
TPM1-214ENST00000558544 IKZF5Q9H5V7 419 aa16■□□□□ 0.15
TPM1-214ENST00000558544 PROK2Q9HC23 129 aa16■□□□□ 0.15
TPM1-214ENST00000558544 EXD2Q9NVH0 621 aa16■□□□□ 0.15
TPM1-214ENST00000558544 SHANK1Q9Y566 2161 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 UTS2O95399 124 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 ATP6V1C1P21283 382 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 EVI2BP34910 448 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 MLLT10P55197 1068 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 DSTNP60981 165 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 TXNL4AP83876 142 aaKnown RBP15.99■□□□□ 0.15
TPM1-214ENST00000558544 RGNQ15493 299 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 GRAMD1BQ3KR37 738 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 ARHGAP11BQ3KRB8 267 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 RUNDC3AQ59EK9 446 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 HEPHL1Q6MZM0 1159 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 CHDHQ8NE62 594 aaPredicted RBP15.99■□□□□ 0.15
TPM1-214ENST00000558544 GRHL3Q8TE85 626 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 FRMD6Q96NE9 622 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 SDF2Q99470 211 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 FAM173AQ9BQD7 235 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 CPPED1Q9BRF8 314 aaPredicted RBP15.99■□□□□ 0.15
TPM1-214ENST00000558544 SLC39A3Q9BRY0 314 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 DOHHQ9BU89 302 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 GALNT9Q9HCQ5 603 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 TUBA8Q9NY65 449 aaPredicted RBP15.99■□□□□ 0.15
TPM1-214ENST00000558544 NTNG1Q9Y2I2 539 aa15.99■□□□□ 0.15
TPM1-214ENST00000558544 PCNX3Q9H6A9 2034 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 NPIPA5A0A0B4J1W7 369 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 PRAMEF27A3QJZ7 478 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 NPIPA7E9PJI5 369 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 SUV39H1O43463 412 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 SCO2O43819 266 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 AK1P00568 194 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 NPIPA8P0DM63 369 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 PPIBP23284 216 aaKnown RBP15.98■□□□□ 0.15
TPM1-214ENST00000558544 PTGDSP41222 190 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 MTPNP58546 118 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 SELPLGQ14242 412 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 GPAT3Q53EU6 434 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 TBCELQ5QJ74 424 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 TMEM81Q6P7N7 255 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 FAM180AQ6UWF9 173 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 C10orf111Q8N326 155 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 PCYOX1LQ8NBM8 494 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 ROPN1LQ96C74 230 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 SNRNP40Q96DI7 357 aaKnown RBP15.98■□□□□ 0.15
TPM1-214ENST00000558544 ANKRD27Q96NW4 1050 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 ANGPTL4Q9BY76 406 aa15.98■□□□□ 0.15
TPM1-214ENST00000558544 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.98■□□□□ 0.15
TPM1-214ENST00000558544 ANKRD33BA6NCL7 494 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 C2orf72A6NCS6 295 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 EVPLLA8MZ36 301 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 B8ZZF3 427 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 FXYD1O00168 92 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 AIM2O14862 343 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 FADS1O60427 444 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 NUDT7P0C024 238 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 PRDX6P30041 224 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 MAGEA8P43361 318 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 PLGLB1Q02325 96 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 FADDQ13158 208 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 INPP5JQ15735 1006 aaPredicted RBP15.97■□□□□ 0.15
TPM1-214ENST00000558544 SYPL1Q16563 259 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 FLYWCH1Q4VC44 716 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 SLC30A6Q6NXT4 461 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 PRICKLE2Q7Z3G6 844 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 ANKFN1Q8N957 763 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 RNF138Q8WVD3 245 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 LRRC58Q96CX6 371 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 CMTM5Q96DZ9 223 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 JSRP1Q96MG2 331 aaPredicted RBP15.97■□□□□ 0.15
TPM1-214ENST00000558544 ZNF350Q9GZX5 532 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 ABCG2Q9UNQ0 655 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 CORO2BQ9UQ03 480 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 GMEB1Q9Y692 573 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 SVILO95425 2214 aa15.97■□□□□ 0.15
TPM1-214ENST00000558544 GNB5O14775 395 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 TRIM3O75382 744 aaPredicted RBP15.96■□□□□ 0.15
TPM1-214ENST00000558544 STX11O75558 287 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 ZIC2O95409 532 aaPredicted RBP15.96■□□□□ 0.15
TPM1-214ENST00000558544 OXSR1O95747 527 aaPredicted RBP15.96■□□□□ 0.15
TPM1-214ENST00000558544 LCN1P31025 176 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 DCTP40126 519 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 MASP1P48740 699 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 HPCAP84074 193 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 FOXO1Q12778 655 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 SNTA1Q13424 505 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 GPR68Q15743 365 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 FITM2Q8N6M3 262 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 ZFP62Q8NB50 900 aaPredicted RBP15.96■□□□□ 0.15
TPM1-214ENST00000558544 POGLUT1Q8NBL1 392 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 OR4C3Q8NH37 302 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 CPT1CQ8TCG5 803 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 ZNF597Q96LX8 424 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 THUMPD3Q9BV44 507 aaKnown RBP15.96■□□□□ 0.15
TPM1-214ENST00000558544 TTTY12Q9BZ98 90 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 ASF1BQ9NVP2 202 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 GID8Q9NWU2 228 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms