RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PTPN6P29350 595 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 S100A3P33764 101 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 PTGDSP41222 190 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 PPP2R2AP63151 447 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 IRX1P78414 480 aaPredicted RBP7.74□□□□□ -1.17
TPM1-213ENST00000558400 TOMM20Q15388 145 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 GSTA3Q16772 222 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.74□□□□□ -1.17
TPM1-213ENST00000558400 NHSL2Q5HYW2 709 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 FNDC7Q5VTL7 733 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 BICRALQ6AI39 1079 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 NXNQ6DKJ4 435 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 CDC73Q6P1J9 531 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 ENPP6Q6UWR7 440 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 FGD2Q7Z6J4 655 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 CD163Q86VB7 1156 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 TRIML2Q8N7C3 387 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 WDSUB1Q8N9V3 476 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 SLC16A11Q8NCK7 471 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 FAM110BQ8TC76 370 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 RNF138Q8WVD3 245 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 ASB5Q8WWX0 329 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 RND1Q92730 232 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 EFHD2Q96C19 240 aaPredicted RBP7.74□□□□□ -1.17
TPM1-213ENST00000558400 GIMAP5Q96F15 307 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 MAELQ96JY0 434 aaKnown RBP7.74□□□□□ -1.17
TPM1-213ENST00000558400 DMRTA2Q96SC8 542 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 BTBD2Q9BX70 525 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 TBL1XR1Q9BZK7 514 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 CHST11Q9NPF2 352 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 EQTNQ9NQ60 294 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 UBQLN4Q9NRR5 601 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 SIRT3Q9NTG7 399 aaPredicted RBP7.74□□□□□ -1.17
TPM1-213ENST00000558400 STOML1Q9UBI4 398 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 WIF1Q9Y5W5 379 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 MED13LQ71F56 2210 aa7.74□□□□□ -1.17
TPM1-213ENST00000558400 DIDO1Q9BTC0 2240 aaKnown RBP7.74□□□□□ -1.17
TPM1-213ENST00000558400 PCNX1Q96RV3 2341 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 C15orf38-AP3S2A0A0A6YYH1 394 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 E9PBE3 544 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 ANKRD28O15084 1053 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 UBDO15205 165 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 FADS1O60427 444 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 NME6O75414 186 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 KCNK2O95069 426 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 UTS2O95399 124 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 AGR2O95994 175 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 AK1P00568 194 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 IL6P05231 212 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 CELA3AP09093 270 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 ATP6V1C1P21283 382 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 TBXA2RP21731 343 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 UQCRC2P22695 453 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 MSX1P28360 303 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 EPHA3P29320 983 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 SRD5A2P31213 254 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 EVI2BP34910 448 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 DSCR4P56555 118 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 HBA1P69905 142 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 POU6F2P78424 691 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 TXNL4AP83876 142 aaKnown RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 GANABQ14697 944 aaKnown RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 LASP1Q14847 261 aaKnown RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 GLYR1Q49A26 553 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 TTMPQ5BVD1 217 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 EMC4Q5J8M3 183 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 EXOSC6Q5RKV6 272 aaKnown RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 ZNF787Q6DD87 383 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 DESI1Q6ICB0 168 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 OR4F3Q6IEY1 312 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 ZNF585AQ6P3V2 769 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 AAGABQ6PD74 315 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 B3GNT6Q6ZMB0 384 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 C6orf120Q7Z4R8 191 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 MISPQ8IVT2 679 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 COX18Q8N8Q8 333 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 OR4K17Q8NGC6 315 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 GOT1L1Q8NHS2 421 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 DUSP19Q8WTR2 217 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 ITLN2Q8WWU7 325 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 JADE3Q92613 823 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 WNT2BQ93097 391 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 ABTB1Q969K4 478 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 CHMP6Q96FZ7 201 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 RMND5BQ96G75 393 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 C16orf58Q96GQ5 468 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 TIMP4Q99727 224 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 WDR55Q9H6Y2 383 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 CXorf36Q9H7Y0 433 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 GALNT9Q9HCQ5 603 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 EXD2Q9NVH0 621 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 AIG1Q9NVV5 245 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 ALKBH4Q9NXW9 302 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 PPP4R1LQ9P1A2 415 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 MARCOQ9UEW3 520 aaPredicted RBP7.73□□□□□ -1.17
TPM1-213ENST00000558400 BTNL2Q9UIR0 455 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 GPR45Q9Y5Y3 372 aa7.73□□□□□ -1.17
TPM1-213ENST00000558400 USH1CQ9Y6N9 552 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms