RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 MRGPRGQ86SM5 289 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 SLC44A2Q8IWA5 706 aaPredicted RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 TMEM251Q8N6I4 163 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ANKRD42Q8N9B4 389 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 OR56A1Q8NGH5 318 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 CA5BP1Q8WTZ4 195 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 NRG4Q8WWG1 115 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 RND1Q92730 232 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 FCRL1Q96LA6 429 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 DHRS1Q96LJ7 313 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 AMDHD1Q96NU7 426 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 TSSK3Q96PN8 268 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 G6PC3Q9BUM1 346 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 MECRQ9BV79 373 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 NXF5Q9H1B4 397 aaKnown RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 DEFB127Q9H1M4 99 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 FOLH1BQ9HBA9 442 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 THAP1Q9NVV9 213 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 FAF1Q9UNN5 650 aaPredicted RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 CHCHD2Q9Y6H1 151 aaPredicted RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 C15orf38-AP3S2A0A0A6YYH1 394 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 A0A1B0GVC2 190 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 SH3PXD2BA1X283 911 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 LINC01387J3KSC0 135 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 SCAMP2O15127 329 aaKnown RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 CFLARO15519 480 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 EMC8O43402 210 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 CBX7O95931 251 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 AGR2O95994 175 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ACTL6AO96019 429 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ABCB1P08183 1280 aaPredicted RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 CT62P0C5K7 136 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 BCKDHAP12694 445 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 SDC1P18827 310 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 PIGAP37287 484 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 MC3RP41968 323 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ETV4P43268 484 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 MAGEA5P43359 124 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 EMDP50402 254 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 FBXW4P57775 412 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 EEF1A1P68104 462 aaKnown RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 TUBA4AP68366 448 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 EMX2Q04743 252 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 HSPB3Q12988 150 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 MED21Q13503 144 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 RCAN2Q14206 197 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 C3AR1Q16581 482 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 NDUFA5Q16718 116 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 EEF1A1P5Q5VTE0 462 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 TIGD3Q6B0B8 471 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 TMEM53Q6P2H8 277 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 TMEM107Q6UX40 140 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ANGPTL8Q6UXH0 198 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ZCCHC23Q6ZST2 131 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 TRILQ7L0X0 811 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 CHMP1BQ7LBR1 199 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 PATL1Q86TB9 770 aaKnown RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 CD163Q86VB7 1156 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 IQCF2Q8IXL9 164 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 OR2L13Q8N349 312 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ZNF527Q8NB42 609 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 OR6Y1Q8NGX8 325 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 OR5P2Q8WZ92 322 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 KAT2AQ92830 837 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ELP4Q96EB1 424 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 SLC35A4Q96G79 324 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 BHLHE41Q9C0J9 482 aaPredicted RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 HOXD1Q9GZZ0 328 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 C12orf65Q9H3J6 166 aaKnown RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 ZNF703Q9H7S9 590 aaPredicted RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 SH2D2AQ9NP31 389 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 ASIC5Q9NY37 505 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 CNOT11Q9UKZ1 510 aaKnown RBP7.95□□□□□ -1.14
USP3-208ENST00000558285 CBLCQ9ULV8 474 aa7.95□□□□□ -1.14
USP3-208ENST00000558285 SHANK1Q9Y566 2161 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 A0A1W2PRB8 838 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 DUXAA6NLW8 204 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 AHRRA9YTQ3 701 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 PRSS44E7EML9 344 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 NPIPA2E9PIF3 369 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 NPIPA3F8WFD2 350 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 G3V3Y1 287 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 H3BNH8 94 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 GSC2O15499 205 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 AKAP10O43572 662 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 NDUFB5O43674 189 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 ZG16O60844 167 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 EDF1O60869 148 aaKnown RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 PDE5AO76074 875 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 PDE9AO76083 593 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 CLDN14O95500 239 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 ALOX5P09917 674 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 UBTFL6P0CB48 400 aaPredicted RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 LBPP18428 481 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 S1PR1P21453 382 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 ACVR2AP27037 513 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 PTGER1P34995 402 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 RFC3P40938 356 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 CASP3P42574 277 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms