RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EMDP50402 254 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 GAS1P54826 345 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CLDN20P56880 219 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 GPX6P59796 221 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 BSPH1Q075Z2 132 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 P2RY6Q15077 328 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TAB1Q15750 504 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CPSF6Q16630 551 aaKnown RBP eCLIP4.62□□□□□ -1.67
SPG11-208ENST00000558155 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.62□□□□□ -1.67
SPG11-208ENST00000558155 TRMT12Q53H54 448 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 CT45A2Q5DJT8 189 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TMEM201Q5SNT2 666 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 FAM120AOSQ5T036 256 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 PDSS1Q5T2R2 415 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 SFRP5Q5T4F7 317 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 STEAP4Q687X5 459 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 FIGNL1Q6PIW4 674 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CCDC25Q86WR0 208 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TMEM139Q8IV31 216 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 WDR75Q8IWA0 830 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 TRIM58Q8NG06 486 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 OR2M3Q8NG83 312 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 OR5M1Q8NGP8 315 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 SGMS2Q8NHU3 365 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 UHMK1Q8TAS1 419 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 DUSP19Q8WTR2 217 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 FAM168AQ92567 244 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 EXT2Q93063 718 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 ERP27Q96DN0 273 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 MUCL1Q96DR8 90 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 ZMYND19Q96E35 227 aaPredicted RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 C1GALT1C1Q96EU7 318 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 PBKQ96KB5 322 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 C12orf65Q9H3J6 166 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 HEATR1Q9H583 2144 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 C12orf49Q9H741 205 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 L2HGDHQ9H9P8 463 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 FOLH1BQ9HBA9 442 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 PLAC1Q9HBJ0 212 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 NMRAL1Q9HBL8 299 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 HHATLQ9HCP6 504 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 SMYD2Q9NRG4 433 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CBLN4Q9NTU7 201 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 MOCS1Q9NZB8 636 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 NUDT4Q9NZJ9 180 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TXNDC16Q9P2K2 825 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 XPR1Q9UBH6 696 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 ASIC3Q9UHC3 531 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 MRTO4Q9UKD2 239 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 CES1P1Q9UKY3 287 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CHMP2BQ9UQN3 213 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 MTO1Q9Y2Z2 717 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 ACOT9Q9Y305 439 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 OR10H1Q9Y4A9 318 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 PCDHA9Q9Y5H5 950 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 PSAT1Q9Y617 370 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TEX264Q9Y6I9 313 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 ZANQ9Y493 2812 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 GOLGA6L10A0A0M3HER8 536 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 TTC36A6NLP5 189 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 SYCE1LA8MT33 242 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 SUPT3HB4E1H0 165 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 PHGDHO43175 533 aaKnown RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 NDUFB5O43674 189 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 SCO2O43819 266 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 KIAA0513O60268 411 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 SUPT3HO75486 399 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 WISP3O95389 354 aaPredicted RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 CLDN9O95484 217 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ADAP00813 363 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 PCSK2P16519 638 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ZNF16P17020 682 aaPredicted RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 IGFBP5P24593 272 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 TTKP33981 857 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 EVI2BP34910 448 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 SLC6A8P48029 635 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 PIK3CGP48736 1102 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 FNTAP49354 379 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 MAPK12P53778 367 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ARL4CP56559 192 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 CARD18P57730 90 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 C21orf58P58505 322 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 IRX1P78414 480 aaPredicted RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 CHRNB3Q05901 458 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ZNF844Q08AG5 666 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 C17orf67Q0P5P2 114 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ITGADQ13349 1161 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 MORF4L2Q15014 288 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ERCC6LQ2NKX8 1250 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 CYP27C1Q4G0S4 372 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 LGSNQ5TDP6 509 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 TTC19Q6DKK2 380 aaPredicted RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 MFSD12Q6NUT3 480 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 SLC48A1Q6P1K1 146 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ZNF662Q6ZS27 426 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 ESPNLQ6ZVH7 1005 aa4.61□□□□□ -1.67
SPG11-208ENST00000558155 BHLHA15Q7RTS1 189 aaPredicted RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 TBC1D1Q86TI0 1168 aaPredicted RBP4.61□□□□□ -1.67
SPG11-208ENST00000558155 ISCA2Q86U28 154 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms