RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PSMB7Q99436 277 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 WRAP53Q9BUR4 548 aaKnown RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 TBC1D10AQ9BXI6 508 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 DUSP16Q9BY84 665 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 MRPL1Q9BYD6 325 aaKnown RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 MID1IP1Q9NPA3 183 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 PFDN4Q9NQP4 134 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 LIPT1Q9Y234 373 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 CHD5Q8TDI0 1954 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 A0A0G2JNG1 304 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 YJEFN3A6XGL0 299 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 ANKRD66B4E2M5 251 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 E7ENQ6 273 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 ADAMDEC1O15204 470 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 BUD23O43709 281 aaKnown RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 STX6O43752 255 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 ZBTB14O43829 449 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 DNAJB6O75190 326 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 SEC22BO75396 215 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 SCRG1O75711 98 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 RECQL5O94762 991 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 BMP10O95393 424 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 GCNT3O95395 438 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 GUCA1CO95843 209 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 TFAP2AP05549 437 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 KLK3P07288 261 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 ABCB1P08183 1280 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 ZNF23P17027 643 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 TIMP3P35625 211 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 TRIM23P36406 574 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 ANP32AP39687 249 aaKnown RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 CCNHP51946 323 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 MFAP4P55083 255 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 PMP22Q01453 160 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 CACNG1Q06432 222 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 PEX6Q13608 980 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 ALCAMQ13740 583 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 KIR2DS5Q14953 304 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 SMU1Q2TAY7 513 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 TMEM52BQ4KMG9 183 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 CYB5D1Q6P9G0 228 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 ISLR2Q6UXK2 745 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 EID3Q8N140 333 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 SETD6Q8TBK2 473 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 FAM222BQ8WU58 562 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 N4BP2L2Q92802 583 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 ST6GAL2Q96JF0 529 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 TGM7Q96PF1 710 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 DUX3Q96PT4 197 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 CBWD1Q9BRT8 395 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 MLPHQ9BV36 600 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 ULBP1Q9BZM6 244 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 FAM129AQ9BZQ8 928 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 UBXN6Q9BZV1 441 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 HRH4Q9H3N8 390 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 SUDS3Q9H7L9 328 aaPredicted RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 PARVGQ9HBI0 331 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 OSGIN1Q9UJX0 560 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 RABL2BQ9UNT1 228 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 POMT1Q9Y6A1 747 aa5.11□□□□□ -1.59
RTF1-204ENST00000558117 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.11□□□□□ -1.59
RTF1-204ENST00000558117 TRBC2A0A5B9 178 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 MITFO75030 526 aaPredicted RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 ALOX12BO75342 701 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 RSL1D1O76021 490 aaKnown RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 TSPAN12O95859 305 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 FYNP06241 537 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 LIPFP07098 398 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 FDPSP14324 419 aaKnown RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 MMP9P14780 707 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 ABOP16442 354 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 MAPK3P27361 379 aaPredicted RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 NMBRP28336 390 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 ACTR1BP42025 376 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 GNPDA1P46926 289 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 NPY4RP50391 375 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 TKTL1P51854 596 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 TPD52P55327 224 aaPredicted RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 ACTR1AP61163 376 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 ARG2P78540 354 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 TNK1Q13470 666 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 FILIP1LQ4L180 1135 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 CARD16Q5EG05 197 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 CCNYL2Q5T2Q4 361 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 LIPNQ5VXI9 398 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 ZDHHC20Q5W0Z9 365 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 CST9LP1Q5W188 147 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 SCARA5Q6ZMJ2 495 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 OTOAQ7RTW8 1153 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 PIGZQ86VD9 579 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 UNC93AQ86WB7 457 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 TUSC5Q8IXB3 177 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 FBXL16Q8N461 479 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 PDLIM5Q96HC4 596 aaKnown RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 ZNF354BQ96LW1 612 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 NSMCE3Q96MG7 304 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 CFAP57Q96MR6 1250 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 C17orf77Q96MU5 243 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 MAP3K3Q99759 626 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms