RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 EIF1ADQ8N9N8 165 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 ZFP28Q8NHY6 868 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 ELP4Q96EB1 424 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 METTL2AQ96IZ6 378 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 DACH2Q96NX9 599 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 CCT7Q99832 543 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 PIGQQ9BRB3 760 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 LMF2Q9BU23 707 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 IQCGQ9H095 443 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 C12orf65Q9H3J6 166 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 FLRT3Q9NZU0 649 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 MED11Q9P086 117 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 PTGDR2Q9Y5Y4 395 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 LINC01387J3KSC0 135 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 MSTNO14793 375 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 CASKO14936 926 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 DIAPH2O60879 1101 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 TNFSF13O75888 250 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 UTS2O95399 124 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 CHEK2O96017 543 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 IFI6P09912 130 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 KRT4P19013 534 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 KLK2P20151 261 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 PRPH2P23942 346 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 GABRA3P34903 492 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 POU4F3Q15319 338 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 ANKRD26P1Q6NSI1 321 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 ZNF551Q7Z340 670 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-235ENST00000557740 C4orf33Q8N1A6 199 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 GPR151Q8TDV0 419 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 EPS8L3Q8TE67 593 aaKnown RBP13.22□□□□□ -0.29
SHMT2-235ENST00000557740 PPCDCQ96CD2 204 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 MBD6Q96DN6 1003 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 C1GALT1C1Q96EU7 318 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 EGLN2Q96KS0 407 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 PINK1Q9BXM7 581 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 NDRG3Q9UGV2 375 aa13.22□□□□□ -0.29
SHMT2-235ENST00000557740 EIF3LQ9Y262 564 aaKnown RBP13.22□□□□□ -0.29
SHMT2-235ENST00000557740 A8MXE2 369 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 H3BML4 177 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 AZIN1O14977 448 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 AKAP10O43572 662 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 ATE1O95260 518 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 HRGP04196 525 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 PRPS2P11908 318 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 RPS3AP61247 264 aaKnown RBP13.21□□□□□ -0.29
SHMT2-235ENST00000557740 RPL38P63173 70 aaKnown RBP13.21□□□□□ -0.29
SHMT2-235ENST00000557740 SIRPAP78324 504 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 DEFB113Q30KQ7 82 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 OR5M1Q8NGP8 315 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 DUSP19Q8WTR2 217 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 SMPDL3BQ92485 455 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 FIG4Q92562 907 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 CIDECQ96AQ7 238 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-235ENST00000557740 ZBED6CLQ96FA7 236 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-235ENST00000557740 ZNF764Q96H86 408 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-235ENST00000557740 FAM111AQ96PZ2 611 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 HHATLQ9HCP6 504 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 ZNF175Q9Y473 711 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 TESMINQ9Y4I5 508 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 CCL27Q9Y4X3 112 aa13.21□□□□□ -0.29
SHMT2-235ENST00000557740 NF1P21359 2839 aa13.21□□□□□ -0.3
SHMT2-235ENST00000557740 HRNRQ86YZ3 2850 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-235ENST00000557740 ACANP16112 2415 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 GXYLT2A0PJZ3 443 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 OR2M5A3KFT3 312 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 NPIPB8E9PQR5 432 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 H0YC42 278 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 GMFGO60234 142 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 TNFRSF21O75509 655 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 FCGR2AP12318 317 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 SDC1P18827 310 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 PRKAG1P54619 331 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 TPD52P55327 224 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-235ENST00000557740 FOXD4Q12950 439 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-235ENST00000557740 PCLAFQ15004 111 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 KIAA0040Q15053 153 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 GRAMD1BQ3KR37 738 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 GLYR1Q49A26 553 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-235ENST00000557740 VWA1Q6PCB0 445 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 CEP70Q8NHQ1 597 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 CLHC1Q8NHS4 586 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 FBXO30Q8TB52 745 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 PIK3R3Q92569 461 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 SLC9A6Q92581 669 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-235ENST00000557740 MS4A4EQ96PG1 132 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
SHMT2-235ENST00000557740 REEP4Q9H6H4 257 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms