RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SAP130Q9H0E3 1048 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 DEPPQ9NTK1 212 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 ADAM21Q9UKJ8 722 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PCDHB14Q9Y5E9 798 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 CAPN7Q9Y6W3 813 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 HELZ2Q9BYK8 2649 aaKnown RBP12.54□□□□□ -0.4
SHMT2-234ENST00000557703 ZGRF1Q86YA3 2104 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 DNAJC13O75165 2243 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 C9JVG2 144 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 H3BNH8 94 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 CLIC1O00299 241 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 TFECO14948 347 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-234ENST00000557703 SNPHO15079 494 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 FADS1O60427 444 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 HCN1O60741 890 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 UTS2O95399 124 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 FAM107AO95990 144 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 BMP2P12643 396 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 CYP4B1P13584 511 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 CAPN3P20807 821 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 ADH7P40394 386 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 MASP1P48740 699 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 ATP12AP54707 1039 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 PPIAP62937 165 aaKnown RBP12.53□□□□□ -0.4
SHMT2-234ENST00000557703 KLF10Q13118 480 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 CYLC2Q14093 348 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-234ENST00000557703 ELOAQ14241 798 aaKnown RBP12.53□□□□□ -0.4
SHMT2-234ENST00000557703 GANABQ14697 944 aaKnown RBP12.53□□□□□ -0.4
SHMT2-234ENST00000557703 SLC10A1Q14973 349 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 C16orf62Q7Z3J2 963 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 RNF130Q86XS8 419 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 SIAH3Q8IW03 269 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 OR5M3Q8NGP4 307 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 XAGE5Q8WWM1 108 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 PIK3R3Q92569 461 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 CDS1Q92903 461 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 EFHD2Q96C19 240 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-234ENST00000557703 GPR137Q96N19 417 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 NODALQ96S42 347 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 SDF2Q99470 211 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 TTTY12Q9BZ98 90 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 TBL1XR1Q9BZK7 514 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF350Q9GZX5 532 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 OR51I1Q9H343 314 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 GID8Q9NWU2 228 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 AP3M1Q9Y2T2 418 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 ARL2BPQ9Y2Y0 163 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 WIF1Q9Y5W5 379 aa12.53□□□□□ -0.4
SHMT2-234ENST00000557703 IGLV3-32A0A0A0MS00 114 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 GXYLT2A0PJZ3 443 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 OR14I1A6ND48 311 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 LINC01387J3KSC0 135 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 HMGN4O00479 90 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 SCDO00767 359 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 DCTN3O75935 186 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 CBX6O95503 412 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 IGHG3P01860 377 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 HOXB9P17482 250 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-234ENST00000557703 GPX2P18283 190 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 PRDX6P30041 224 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 GCKP35557 465 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 CDKN2CP42773 168 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 DNASE1L1P49184 302 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 GPR85P60893 370 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 HPCAP84074 193 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 RGNQ15493 299 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-234ENST00000557703 PRAMEF20Q5VT98 475 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 ARHGAP11AQ6P4F7 1023 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 SLC2A7Q6PXP3 512 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 ANGPTL8Q6UXH0 198 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 LRRC74BQ6ZQY2 392 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 PLCZ1Q86YW0 608 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 EID3Q8N140 333 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 YIPF4Q9BSR8 244 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 PTGES2Q9H7Z7 377 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 MTHFD2LQ9H903 347 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-234ENST00000557703 LUZP4Q9P127 313 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 P2RX2Q9UBL9 471 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 SUCOQ9UBS9 1254 aaKnown RBP12.52□□□□□ -0.41
SHMT2-234ENST00000557703 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
SHMT2-234ENST00000557703 EML6Q6ZMW3 1958 aa12.52□□□□□ -0.41
SHMT2-234ENST00000557703 TRBV5-3A0A0A0MS03 114 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 A0A1B0GVC2 190 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 J3QKU1 62 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 NDUFAB1O14561 156 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 GSNP06396 782 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 OR12D1P0DN82 309 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 PTGDSP41222 190 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 CRATP43155 626 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 MVDP53602 400 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 CRISP3P54108 245 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms