RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 SDC1P18827 310 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 CDH5P33151 784 aaPredicted RBP3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 ALDH3B2P48448 385 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 PAX2Q02962 417 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC22A6Q4U2R8 563 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 SLX4IPQ5VYV7 408 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 RNLSQ5VYX0 342 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 OLFML2AQ68BL7 652 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 FBXL22Q6P050 247 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 STAC2Q6ZMT1 411 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 LRRC70Q7Z2Q7 622 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 SERINC5Q86VE9 423 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 CDC20BQ86Y33 519 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC39A11Q8N1S5 342 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 OR10T2Q8NGX3 314 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 VN1R17PQ8TDU5 208 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 TPPP3Q9BW30 176 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 NFKBIZQ9BYH8 718 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC25A51Q9H1U9 297 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 OPN3Q9H1Y3 402 aaPredicted RBP3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 RIBC2Q9H4K1 309 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 LAMP5Q9UJQ1 280 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 BLOC1S6Q9UL45 172 aa3.35□□□□□ -1.87
EFCAB11-213ENST00000557685 CCT8L1PA6NM43 557 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 FAM220BPB1ANY3 271 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC17A2O00624 439 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 ANGPT2O15123 496 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 ZNF354AO60765 605 aaPredicted RBP3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 TRIM3O75382 744 aaPredicted RBP3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 CSF2P04141 144 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 ALPIP09923 528 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 CT45A10P0DMU9 189 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 LAMP1P11279 417 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 KRT13P13646 458 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 PSMA2P25787 234 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 LMO4P61968 165 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 IL18R1Q13478 541 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 RUNX3Q13761 415 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC10A1Q14973 349 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 CYP51A1Q16850 503 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 Q1RN00 199 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 LINC01620Q4KN68 170 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 MEDAGQ5VYS4 303 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 ASPHD2Q6ICH7 369 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 GCNT7Q6ZNI0 430 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 PARGQ86W56 976 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC30A2Q9BRI3 323 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 MEPEQ9NQ76 525 aaPredicted RBP3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 RBM28Q9NW13 759 aaKnown RBP3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 EHFQ9NZC4 300 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 TMOD2Q9NZR1 351 aa3.34□□□□□ -1.87
EFCAB11-213ENST00000557685 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 A8MX80 341 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 CLDN5O00501 218 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 DUX1O43812 170 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 MBD3O95983 291 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 HSPA5P11021 654 aaKnown RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 PGAM2P15259 253 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 XRCC1P18887 633 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 IDSP22304 550 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 ACVR1BP36896 505 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 FNTAP49354 379 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 IST1P53990 364 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 DSCR10P59022 87 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 PLOD1Q02809 727 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 PUDPQ08623 228 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 OVGP1Q12889 678 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 TAF7Q15545 349 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 TIMM50Q3ZCQ8 353 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 NCR3LG1Q68D85 454 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 SULT1C3Q6IMI6 304 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 SCYL2Q6P3W7 929 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 CYS1Q717R9 158 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 HSD11B1LQ7Z5J1 315 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 UNC5CLQ8IV45 518 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 HSCBQ8IWL3 235 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 LYG1Q8N1E2 194 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 Q8N9G6 341 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 ZSCAN4Q8NAM6 433 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 ANKRD9Q96BM1 317 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 DTNBP1Q96EV8 351 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 PPP1R16AQ96I34 528 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 CASD1Q96PB1 797 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 RANBP9Q96S59 729 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 FARSBQ9NSD9 589 aaKnown RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 SPACA6W5XKT8 324 aa3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
EFCAB11-213ENST00000557685 STX11O75558 287 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 SLC2A10O95528 541 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 OPN1LWP04000 364 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 ASNSP08243 561 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 UMPSP11172 480 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 ANXA3P12429 323 aa3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 RPL4P36578 427 aaKnown RBP3.32□□□□□ -1.88
EFCAB11-213ENST00000557685 DLSTP36957 453 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms