RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 NSL1Q96IY1 281 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 FRMD6Q96NE9 622 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 SIGLEC12Q96PQ1 595 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 FAM173AQ9BQD7 235 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 GPATCH1Q9BRR8 931 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 YIPF4Q9BSR8 244 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 THUMPD3Q9BV44 507 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 ANGPTL4Q9BY76 406 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 KAT8Q9H7Z6 458 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 NANOGQ9H9S0 305 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 BCL2L10Q9HD36 194 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 SUCOQ9UBS9 1254 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 CNOT11Q9UKZ1 510 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 BOKQ9UMX3 212 aaPredicted RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 HEATR5AQ86XA9 2040 aa12.96□□□□□ -0.34
SUPT16H-208ENST00000557652 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ALG1L2C9J202 215 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 H3BNH8 94 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 AIM2O14862 343 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 CRYABP02511 175 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ARAFP10398 606 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 NR2F1P10589 423 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ESRRAP11474 423 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 CYP4B1P13584 511 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 HPGDP15428 266 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 CD1EP15812 388 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC6A2P23975 617 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 CASP3P42574 277 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 NUDT2P50583 147 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ATP12AP54707 1039 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 FBXW4P57775 412 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 RPS26P62854 115 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 HYAL4Q2M3T9 481 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 GCNT6Q5T4J0 391 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 INTS11Q5TA45 600 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 C16orf89Q6UX73 402 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 BNC2Q6ZN30 1099 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 WDR53Q7Z5U6 358 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 PRR22Q8IZ63 422 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 CLEC4FQ8N1N0 589 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ARHGAP24Q8N264 748 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 C11orf65Q8NCR3 313 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 EFHD2Q96C19 240 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 TMEM41AQ96HV5 264 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ECSITQ9BQ95 431 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 OSBPL11Q9BXB4 747 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 METTL7AQ9H8H3 244 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 MTHFD2LQ9H903 347 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 IL1RL2Q9HB29 575 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 CACYBPQ9HB71 228 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 QPCTLQ9NXS2 382 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 WDR45Q9Y484 360 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
SUPT16H-208ENST00000557652 A0A0G2JPF8 293 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 HNRNPCL2B2RXH8 293 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 HNRNPCL3B7ZW38 293 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 C5orf58C9J3I9 102 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 K7EM74 188 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 SCDO00767 359 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 KIAA0513O60268 411 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 FADS1O60427 444 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ATP5HO75947 161 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 SORBS2O94875 1100 aaKnown RBP12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 RASAL1O95294 804 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 UTS2O95399 124 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 HNRNPCL4P0DMR1 293 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 CCL3P10147 92 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ETFAP13804 333 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ETS2P15036 469 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 EVI2BP34910 448 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ADH7P40394 386 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 CD97P48960 835 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 LY6DQ14210 128 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF141Q15928 474 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 FLYWCH1Q4VC44 716 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 GPAT3Q53EU6 434 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 COX20Q5RI15 118 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 REEP3Q6NUK4 255 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 GALNTL5Q7Z4T8 443 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 MDGA2Q7Z553 956 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 PGAM4Q8N0Y7 254 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF619Q8N2I2 560 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 CATSPER1Q8NEC5 780 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 BHLHE22Q8NFJ8 381 aaPredicted RBP12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 TNIP2Q8NFZ5 429 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 BBS10Q8TAM1 723 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 FBXO30Q8TB52 745 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 PNPT1Q8TCS8 783 aaKnown RBP12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 RAB8BQ92930 207 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF597Q96LX8 424 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms