RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 CLEC12AQ5QGZ9 265 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 KIAA1161Q6NSJ0 714 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ADCK2Q7Z695 626 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 C11orf74Q86VG3 221 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 KLBQ86Z14 1044 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 GPALPP1Q8IXQ4 340 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 KREMEN2Q8NCW0 462 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 OR4M2Q8NGB6 313 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 PRAP1Q96NZ9 151 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ABCG5Q9H222 651 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ENAMQ9NRM1 1142 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 IMP3Q9NV31 184 aaKnown RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 CNIH4Q9P003 139 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 RABL2AQ9UBK7 228 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 RABL2BQ9UNT1 228 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 A0A0A6YYJ9 748 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 A0A1B0GVI7 797 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 FABP7O15540 132 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ADH1AP07327 375 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ALPPL2P10696 532 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 SNRPD2P62316 118 aaKnown RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 CSNK1G2P78368 415 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 SLC30A6Q6NXT4 461 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 BAIAP2L2Q6UXY1 529 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 PLEKHM3Q6ZWE6 761 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 C2orf73Q8N5S3 287 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 BRIX1Q8TDN6 353 aaKnown RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ZNF431Q8TF32 576 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 RADILQ96JH8 1075 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 SLC38A1Q9H2H9 487 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 LINC00597Q9H2U6 94 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 GHITMQ9H3K2 345 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 EMC3Q9P0I2 261 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 SLC23A1Q9UHI7 598 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 NUP50Q9UKX7 468 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 C2orf92A0A1B0GVN3 265 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 A0A1W2PPV9 198 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 FEZF1A0PJY2 475 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 LRIT2A6NDA9 550 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 SLC22A5O76082 557 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 AGR2O95994 175 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 TPOP07202 933 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 CSNK2A2P19784 350 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 TSFMP43897 325 aaKnown RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 PRKAG1P54619 331 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 PITPNAQ00169 270 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 MAP4K2Q12851 820 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 MADCAM1Q13477 382 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 ARHGEF6Q15052 776 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 FAM205BPQ63HN1 556 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 METRNLQ641Q3 311 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 ERN2Q76MJ5 926 aaKnown RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 CXXC5Q7LFL8 322 aaKnown RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 LRRTM4Q86VH4 590 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 TEX19Q8NA77 164 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 TP53I13Q8NBR0 393 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 OR8H1Q8NGG4 311 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 HGDQ93099 445 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 COX14Q96I36 57 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 OR7D2Q96RA2 312 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 MENTQ9BUN1 341 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 MTG2Q9H4K7 406 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 CACYBPQ9HB71 228 aaKnown RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 CTPS2Q9NRF8 586 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 TMEM39AQ9NV64 488 aa15.22■□□□□ 0.03
SHMT2-231ENST00000557433 ZFR2Q9UPR6 939 aaKnown RBP15.22■□□□□ 0.03
SHMT2-231ENST00000557433 DUXAA6NLW8 204 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 CPSF4LA6NMK7 179 aaKnown RBP15.21■□□□□ 0.03
SHMT2-231ENST00000557433 PQBP1O60828 265 aaKnown RBP15.21■□□□□ 0.03
SHMT2-231ENST00000557433 GNRH1P01148 92 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 MPIP34949 423 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 CCR2P41597 374 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 RGS8P57771 180 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-231ENST00000557433 FCN2Q15485 313 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 ZIC1Q15915 447 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 NTRK2Q16620 822 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 MRM1Q6IN84 353 aaKnown RBP15.21■□□□□ 0.03
SHMT2-231ENST00000557433 RPL13AP3Q6NVV1 102 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 TEX261Q6UWH6 196 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 WASH2PQ6VEQ5 465 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 RTL10Q7L3V2 364 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 ABI3BPQ7Z7G0 1075 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 SRFBP1Q8NEF9 429 aaKnown RBP15.21■□□□□ 0.03
SHMT2-231ENST00000557433 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 PHF21AQ96BD5 680 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 EIF3KQ9UBQ5 218 aaKnown RBP15.21■□□□□ 0.03
SHMT2-231ENST00000557433 KCNN3Q9UGI6 736 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 NPFFR2Q9Y5X5 522 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 U3KQ87 197 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 PLXND1Q9Y4D7 1925 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 MYOFQ9NZM1 2061 aa15.21■□□□□ 0.03
SHMT2-231ENST00000557433 MT-ND5P03915 603 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 MLLT1Q03111 559 aaPredicted RBP15.21■□□□□ 0.02
SHMT2-231ENST00000557433 FZD5Q13467 585 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 GALEQ14376 348 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 CEBPEQ15744 281 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms