RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NELFEP18615 380 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 TRIM23P36406 574 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 MMP12P39900 470 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 TSFMP43897 325 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 SUOXP51687 545 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 PPP1CAP62136 330 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 GNB1P62873 340 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 STK4Q13043 487 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 TUBB2AQ13885 445 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 MELKQ14680 651 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 PYCR3Q53H96 274 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 TFDP3Q5H9I0 405 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 C1orf220Q5T0J3 134 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 KIAA0930Q6ICG6 404 aaPredicted RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 IGFL3Q6UXB1 125 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 C1orf122Q6ZSJ8 110 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 SHISA6Q6ZSJ9 500 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 TMEM26Q6ZUK4 368 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 C11orf57Q6ZUT1 292 aaPredicted RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 FAM183BPQ6ZVS7 135 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 HOOK3Q86VS8 718 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 FAM131BQ86XD5 332 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 DNAAF5Q86Y56 855 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 C12orf56Q8IXR9 622 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 MARVELD2Q8N4S9 558 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ANKRD20A12PQ8NF67 263 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 OR10Q1Q8NGQ4 319 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 CCDC110Q8TBZ0 833 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 CCDC47Q96A33 483 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 AP2M1Q96CW1 435 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ARSGQ96EG1 525 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 FAM120BQ96EK7 910 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 IP6K3Q96PC2 410 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 BARD1Q99728 777 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 TUBB2BQ9BVA1 445 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ABCG8Q9H221 673 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 KCNJ16Q9NPI9 418 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 SCRT2Q9NQ03 307 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 DMAC2Q9NW81 257 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 GPATCH2LQ9NWQ4 482 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD8-212ENST00000557329 STAP1Q9ULZ2 295 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ZNF148Q9UQR1 794 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 B3GALT5Q9Y2C3 310 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ACANP16112 2415 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 JMJD1CQ15652 2540 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 LRP4O75096 1905 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 IGKV3D-15A0A087WSY6 115 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TEX13DA0A0J9YY54 714 aaPredicted RBP3.35□□□□□ -1.87
CHD8-212ENST00000557329 GSAPA4D1B5 854 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TRIM49BA6NDI0 452 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TLCD2A6NGC4 264 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 OR5K4A6NMS3 321 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 OR52A4PA6NMU1 304 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 E7EQ34 232 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 NPIPA5E9PKD4 350 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 PDXKO00764 312 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 KLF11O14901 512 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CETN3O15182 167 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TOX3O15405 576 aaPredicted RBP3.35□□□□□ -1.87
CHD8-212ENST00000557329 ZNF749O43361 778 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 AVILO75366 819 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CD160O95971 181 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 C9P02748 559 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TPOP07202 933 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 IVLP07476 585 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CDH3P22223 829 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 UGT1A4P22310 534 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CA6P23280 308 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 EPHA2P29317 976 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SPAM1P38567 509 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SLC15A1P46059 708 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SLC9A3P48764 834 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SNX16P57768 344 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CETN1Q12798 172 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 NCF4Q15080 339 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SYCP1Q15431 976 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CYTH1Q15438 398 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CBWD6Q4V339 395 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 PDLIM3Q53GG5 364 aaPredicted RBP3.35□□□□□ -1.87
CHD8-212ENST00000557329 CBWD3Q5JTY5 395 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 BRMS1LQ5PSV4 323 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SCYL2Q6P3W7 929 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 PODNL1Q6PEZ8 512 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 ISLR2Q6UXK2 745 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 RFLNAQ6ZTI6 216 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 SH2D5Q6ZV89 423 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 HSD11B1LQ7Z5J1 315 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TBC1D1Q86TI0 1168 aaPredicted RBP3.35□□□□□ -1.87
CHD8-212ENST00000557329 CLYBLQ8N0X4 340 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CPSF7Q8N684 471 aaKnown RBP3.35□□□□□ -1.87
CHD8-212ENST00000557329 ZNF611Q8N823 705 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 EXD1Q8NHP7 514 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 AGAP11Q8TF27 550 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 CCDC107Q8WV48 283 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 TEKT4Q8WW24 435 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 FCAMRQ8WWV6 532 aa3.35□□□□□ -1.87
CHD8-212ENST00000557329 PTERQ96BW5 349 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms