RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	HDHD5	Q9BXW7	423 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PACSIN1	Q9BY11	444 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PARVB	Q9HBI1	364 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	EMC7	Q9NPA0	242 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	EIF2B3	Q9NR50	452 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CHRAC1	Q9NRG0	131 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	HOMER3	Q9NSC5	361 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TREX1	Q9NSU2	369 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAIM	Q9NVQ4	179 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CAPN11	Q9UMQ6	739 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	EXO1	Q9UQ84	846 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	B3GALT5	Q9Y2C3	310 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	WBP11	Q9Y2W2	641 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RNF115	Q9Y4L5	304 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RYR3	Q15413	4870 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076		A0A088AWK7	358 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	IQANK1	A0A1B0GTG1	560 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	LRIT2	A6NDA9	550 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SLC22A20	A6NK97	555 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SPOP	O43791	374 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	KIAA0513	O60268	411 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	VENTX	O95231	258 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SERPINC1	P01008	464 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	TGFA	P01135	160 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	COX7A2	P14406	83 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	PSMB1	P20618	241 aa	Known RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF10	P21506	573 aa	Predicted RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	RPL22	P35268	128 aa	Known RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	STAR	P49675	285 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	NUDT6	P53370	316 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	LIM2	P55344	173 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CLDN18	P56856	261 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	EEFSEC	P57772	596 aa	Known RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	STXBP1	P61764	594 aa	Known RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	RPP38	P78345	283 aa	Known RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAP	Q12884	760 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SP140	Q13342	867 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SNTA1	Q13424	505 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CSHL1	Q14406	222 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	RAB35	Q15286	201 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	GUSBP1	Q15486	140 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	ASTE1	Q2TB18	679 aa	Predicted RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	TTLL9	Q3SXZ7	439 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	PCID2	Q5JVF3	399 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	NCMAP	Q5T1S8	102 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CCDC181	Q5TID7	509 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	DUPD1	Q68J44	220 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	TMEM81	Q6P7N7	255 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	AGTRAP	Q6RW13	159 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CHMP1B	Q7LBR1	199 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	P4HA3	Q7Z4N8	544 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CLNK	Q7Z7G1	428 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	EXOC3L1	Q86VI1	746 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CMIP	Q8IY22	773 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	KLHDC8A	Q8IYD2	350 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	TAGAP	Q8N103	731 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAM71D	Q8N9W8	422 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR8K1	Q8NGG5	319 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR56A3	Q8NH54	315 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	C10orf105	Q8TEF2	133 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	ATL1	Q8WXF7	558 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAM136A	Q96C01	138 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	IQCD	Q96DY2	449 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	BOD1	Q96IK1	185 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	RUNDC3B	Q96NL0	473 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR4K3	Q96R72	315 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	TRIM2	Q9C040	744 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR2B2	Q9GZK3	357 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	AICDA	Q9GZX7	198 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	NUP62CL	Q9H1M0	184 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CHODL	Q9H9P2	273 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	RNF122	Q9H9V4	155 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	NGB	Q9NPG2	151 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	FANCF	Q9NPI8	374 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	DNAJC11	Q9NVH1	559 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	TBCCD1	Q9NVR7	557 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CISD1	Q9NZ45	108 aa	Known RBP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	HEY2	Q9UBP5	337 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	AMFR	Q9UKV5	643 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	DAPP1	Q9UN19	280 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	PROCR	Q9UNN8	238 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	PDE10A	Q9Y233	779 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	DTX4	Q9Y2E6	619 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CRYL1	Q9Y2S2	319 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	GPR52	Q9Y2T5	361 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	DHRS7	Q9Y394	339 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	HYOU1	Q9Y4L1	999 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	SNX8	Q9Y5X2	465 aa		4.19	□□□□□ -1.74
SCFD1-223	ENST00000557076	CTAGE15	A4D2H0	777 aa		4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR6C76	A6NM76	312 aa		4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076	CXorf49	A8MYA2	514 aa	Predicted RBP	4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076	C4orf51	C9J302	202 aa		4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076		E5RI56	91 aa		4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZIC3	O60481	467 aa		4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076	PROP1	O75360	226 aa		4.18	□□□□□ -1.74
SCFD1-223	ENST00000557076	RBMXL2	O75526	392 aa	Known RBP	4.18	□□□□□ -1.74

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