RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SOX6P35712 828 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 TGFBR2P37173 567 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ARL1P40616 181 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ETV6P41212 452 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 TSPAN7P41732 249 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CASP3P42574 277 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GNPDA1P46926 289 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 KRT6CP48668 564 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MVDP53602 400 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ERVPABLB-1P60509 514 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MAXP61244 160 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 VBP1P61758 197 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 RPL38P63173 70 aaKnown RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 IFITM3Q01628 133 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 BNC1Q01954 994 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 PRKCZQ05513 592 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CSTF3Q12996 717 aaKnown RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 RAPSNQ13702 412 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GTF2H2Q13888 395 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GPR18Q14330 331 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 IL13RA2Q14627 380 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 KIAA0040Q15053 153 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MAPK11Q15759 364 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 LRIT3Q3SXY7 679 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 FAM174BQ3ZCQ3 159 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 SYTL3Q4VX76 610 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 SETMARQ53H47 684 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CLLU1OSQ5K130 101 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CDKL4Q5MAI5 379 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 SPANXN2Q5MJ10 180 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 Q5PR19 223 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MLIPQ5VWP3 458 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 RSBN1Q5VWQ0 802 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 KDM4DQ6B0I6 523 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 OR2T5Q6IEZ7 315 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GTF2H2CQ6P1K8 395 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CERS6Q6ZMG9 384 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 DET1Q7L5Y6 550 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GLT6D1Q7Z4J2 308 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 NANOGNBQ7Z5D8 188 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GOLGA7Q7Z5G4 137 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 DSG4Q86SJ6 1040 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF683Q8IZ20 524 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 OR8H2Q8N162 312 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 FAM86B1Q8N7N1 296 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 OR13C4Q8NGS5 318 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 OR2T29Q8NH02 315 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 OR10A6Q8NH74 314 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 LILRB4Q8NHJ6 448 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 C9orf43Q8TAL5 461 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CNIH3Q8TBE1 160 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CD200R1Q8TD46 325 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 UBTD2Q8WUN7 234 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CAPSLQ8WWF8 208 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 PSMG2Q969U7 264 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 RHBDF1Q96CC6 855 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 KLHL5Q96PQ7 755 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 OR52E6Q96RD3 313 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ACOX2Q99424 681 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 SEMA3CQ99985 751 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 WDR77Q9BQA1 342 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MGME1Q9BQP7 344 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CCDC32Q9BV29 185 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 HOXD1Q9GZZ0 328 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 RACGAP1Q9H0H5 632 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 DCSTAMPQ9H295 470 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 PRO3102Q9H379 93 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 TPK1Q9H3S4 243 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ACTL8Q9H568 366 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 KRCC1Q9NPI7 259 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ABCB10Q9NRK6 738 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 KRT84Q9NSB2 600 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 PLCXD1Q9NUJ7 323 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MPP6Q9NZW5 540 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 VAPAQ9P0L0 249 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 GALPQ9UBC7 116 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 CRNNQ9UBG3 495 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ENOPH1Q9UHY7 261 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF225Q9UK10 706 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ZNF221Q9UK13 617 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 ICKQ9UPZ9 632 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 DHDHQ9UQ10 334 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 SCML2Q9UQR0 700 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 RNF6Q9Y252 685 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 MAGED1Q9Y5V3 778 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-246ENST00000557030 FRMPD3Q5JV73 1810 aa4.41□□□□□ -1.7
ATXN3-246ENST00000557030 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.7
ATXN3-246ENST00000557030 LAMA3Q16787 3333 aa4.4□□□□□ -1.7
ATXN3-246ENST00000557030 A0A075B6Q4 140 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 PABPN1LA6NDY0 278 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 C17orf100A8MU93 164 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 FAM25AB3EWG3 89 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 FAM25CB3EWG5 89 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 FAM25GB3EWG6 89 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 H7C0S8 307 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM189-UBE2V1I3L0A0 370 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 GTPBP1O00178 669 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CCL22O00626 93 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 STX7O15400 261 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms