RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ARL6IP5O75915 188 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PCSK2P16519 638 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 UGT2B7P16662 529 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HOXC13P31276 330 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PYCR1P32322 319 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 GJA5P36382 358 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MC3RP41968 323 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ART1P52961 327 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 GPR17Q13304 367 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ASAH1Q13510 395 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ENPP2Q13822 863 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PDGFRLQ15198 375 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SYPL1Q16563 259 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF750Q32MQ0 723 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 C8orf82Q6P1X6 216 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZC3H14Q6PJT7 736 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ARSKQ6UWY0 536 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ARL14Q8N4G2 192 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 STEAP2Q8NFT2 490 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 OR51L1Q8NGJ5 315 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TM9SF4Q92544 642 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MOAP1Q96BY2 351 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZMYND19Q96E35 227 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CHFRQ96EP1 664 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 C7orf34Q96L11 122 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MICU1Q9BPX6 476 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 C7orf50Q9BRJ6 194 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PINK1Q9BXM7 581 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TRIM2Q9C040 744 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 P2RY12Q9H244 342 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MYNNQ9NPC7 610 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 RXFP3Q9NSD7 469 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SIRT5Q9NXA8 310 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PGAP2Q9UHJ9 254 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SH2B3Q9UQQ2 575 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC45A1Q9Y2W3 748 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 INSL5Q9Y5Q6 135 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 XIRP1Q702N8 1843 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 GFRA2O00451 464 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC22A5O76082 557 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC16A8O95907 504 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ADH1AP07327 375 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HLA-DMAP28067 261 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SHC1P29353 583 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 AHRP35869 848 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HMGCLP35914 325 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HSD17B2P37059 387 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC6A11P48066 632 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SPINT3P49223 89 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PER3P56645 1201 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 NKX3-2P78367 333 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 GPR176Q14439 515 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 GRK1Q15835 563 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 FAM209AQ5JX71 171 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 NXNL2Q5VZ03 156 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 FIGNL1Q6PIW4 674 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TRIM46Q7Z4K8 759 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MRPL10Q7Z7H8 261 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 LRRTM4Q86VH4 590 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MYLIPQ8WY64 445 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC7A6Q92536 515 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 LMF1Q96S06 567 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PKMYT1Q99640 499 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ORAI3Q9BRQ5 295 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 DPH7Q9BTV6 452 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ARNT2Q9HBZ2 717 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HMX1Q9NP08 348 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ATPIF1Q9UII2 106 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PCDHGA2Q9Y5H1 932 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 LRRC37AA6NMS7 1700 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 A0A0B4J203 849 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 B4DXG7 233 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 C11orf98E9PRG8 122 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC43A1O75387 559 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CDC123O75794 336 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 FGF19O95750 216 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SYPP08247 313 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SPARCP09486 303 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ANXA7P20073 488 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HCCSP53701 268 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PFN3P60673 137 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ACTA2P62736 377 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ACTG2P63267 376 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TLE2Q04725 743 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 RING1Q06587 406 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 POU4F2Q12837 409 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC14A2Q15849 920 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CLPPQ16740 277 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC5A12Q1EHB4 618 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF385BQ569K4 471 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TCTE1Q5JU00 501 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 VITQ6UXI7 678 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CREB3L2Q70SY1 520 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 MEPCEQ7L2J0 689 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 NATD1Q8N6N6 113 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TTLQ8NG68 377 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 OR5AK2Q8NH90 309 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PFN4Q8NHR9 129 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TMEM255BQ8WV15 326 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 FOXN4Q96NZ1 517 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms