RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ANTXRLA6NF34 631 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 HNRNPCL2B2RXH8 293 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 HNRNPCL3B7ZW38 293 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CDC42EP2O14613 210 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CHST10O43529 356 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 LATO43561 262 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 RNF13O43567 381 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CHP2O43745 196 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SLC19A2O60779 497 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 EFCAB14O75071 495 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 MOSPD3O75425 235 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 HNRNPCL4P0DMR1 293 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SLC6A1P30531 599 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 NTSP30990 170 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 IFNGR2P38484 337 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CLDN2P57739 230 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CSNK1G2P78368 415 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 REEP5Q00765 189 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 RIN1Q13671 783 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 ZNF697Q5TEC3 545 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 C18orf63Q68DL7 685 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 LILRA6Q6PI73 481 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 KIAA0907Q7Z7F0 614 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 CCDC28AQ8IWP9 274 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 OR5K2Q8NHB8 316 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SMAP2Q8WU79 429 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 PCNPQ8WW12 178 aaKnown RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 CREB3L1Q96BA8 519 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 CHFRQ96EP1 664 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SAMD8Q96LT4 415 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 HYLS1Q96M11 299 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 OR7D2Q96RA2 312 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 BTBD1Q9H0C5 482 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 MED28Q9H204 178 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SLC38A1Q9H2H9 487 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 WASH6PQ9NQA3 447 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 ENAMQ9NRM1 1142 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 ZNF624Q9P2J8 865 aaPredicted RBP10.66□□□□□ -0.7
SRP54-213ENST00000556994 ADAM30Q9UKF2 790 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 MGAT4AQ9UM21 535 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 GPR34Q9UPC5 381 aa10.66□□□□□ -0.7
SRP54-213ENST00000556994 SCN3AQ9NY46 2000 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 IGKV1-8A0A0C4DH67 115 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 A0A1W2PR48 441 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 LRIT2A6NDA9 550 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 FGF18O76093 207 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 MC3RP41968 323 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 ATP12AP54707 1039 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 ST8SIA6P61647 398 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 MLC1Q15049 377 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 PLA1AQ53H76 456 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 SDE2Q6IQ49 451 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 PLBD1Q6P4A8 553 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 CACUL1Q86Y37 369 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 TMEM99Q8N816 258 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 OR11H7Q8NGC8 314 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 ZNF431Q8TF32 576 aaPredicted RBP10.65□□□□□ -0.7
SRP54-213ENST00000556994 ING5Q8WYH8 240 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 KAT2AQ92830 837 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 OSTF1Q92882 214 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 RFT1Q96AA3 541 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 ZNF514Q96K75 400 aaPredicted RBP10.65□□□□□ -0.7
SRP54-213ENST00000556994 MENTQ9BUN1 341 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 C6orf106Q9H6K1 298 aaPredicted RBP10.65□□□□□ -0.7
SRP54-213ENST00000556994 NUDT15Q9NV35 164 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 POLHQ9Y253 713 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 RASD1Q9Y272 281 aa10.65□□□□□ -0.7
SRP54-213ENST00000556994 EXOGQ9Y2C4 368 aaKnown RBP10.65□□□□□ -0.7
SRP54-213ENST00000556994 E9PI62 339 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 CASC3O15234 703 aaKnown RBP10.64□□□□□ -0.71
SRP54-213ENST00000556994 ERI3O43414 337 aaKnown RBP10.64□□□□□ -0.71
SRP54-213ENST00000556994 REM1O75628 298 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 SCO1O75880 301 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 RGS9O75916 674 aaPredicted RBP10.64□□□□□ -0.71
SRP54-213ENST00000556994 IGHA1P01876 353 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 LAG3P18627 525 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 PTBP1P26599 531 aaKnown RBP eCLIP10.64□□□□□ -0.718e-9■■■■□ 22.1
SRP54-213ENST00000556994 HTR1FP30939 366 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 BTCP35070 178 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 CLCNKAP51800 687 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 EPHA5P54756 1037 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 TGM3Q08188 693 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 SLC9A5Q14940 896 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 PGGHGQ32M88 737 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 ARL9Q6T311 187 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 PLEKHM3Q6ZWE6 761 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 CXXC5Q7LFL8 322 aaKnown RBP10.64□□□□□ -0.71
SRP54-213ENST00000556994 SFTPA1Q8IWL2 248 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 OR8H3Q8N146 312 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 OR11H4Q8NGC9 324 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 OR6C4Q8NGE1 309 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 OR5M3Q8NGP4 307 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 OR9A2Q8NGT5 310 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 HSD17B8Q92506 261 aa10.64□□□□□ -0.71
SRP54-213ENST00000556994 ARSGQ96EG1 525 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms