RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ALKBH4Q9NXW9 302 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 WIPF3A6NGB9 483 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 E9PBE3 544 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 SDHDO14521 159 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 DIAPH2O60879 1101 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 IL33O95760 270 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 IDO1P14902 403 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 ATP6V1C1P21283 382 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 S100A3P33764 101 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 NME5P56597 212 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 SF3B4Q15427 424 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLIRP-207ENST00000556831 OR4F3Q6IEY1 312 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 NEIL3Q8TAT5 605 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 ADAMTS15Q8TE58 950 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 PHF10Q8WUB8 498 aaKnown RBP12.87□□□□□ -0.35
SLIRP-207ENST00000556831 PIK3R3Q92569 461 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 TESCQ96BS2 214 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 WDR55Q9H6Y2 383 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-207ENST00000556831 SERHLQ9NQF3 203 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 FAM120CQ9NX05 1096 aaKnown RBP12.87□□□□□ -0.35
SLIRP-207ENST00000556831 NTMQ9P121 344 aa12.87□□□□□ -0.35
SLIRP-207ENST00000556831 CSMD1Q96PZ7 3565 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 MYO7BQ6PIF6 2116 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 RNF103-CHMP3A0A140T963 221 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 FAM47E-STBD1D6RA91 191 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 RNASET2O00584 256 aaKnown RBP12.86□□□□□ -0.35
SLIRP-207ENST00000556831 WDR1O75083 606 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 NKX2-2O95096 273 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 UTS2O95399 124 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
SLIRP-207ENST00000556831 HPNP05981 417 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 GABRA1P14867 456 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 ACVR2AP27037 513 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 PTPN6P29350 595 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 STX1BP61266 288 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 POU6F2P78424 691 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-207ENST00000556831 LRRC74AQ0VAA2 488 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 STX5Q13190 355 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 FAM174BQ3ZCQ3 159 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 GXYLT1Q4G148 440 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 B3GNT6Q6ZMB0 384 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 GLB1L3Q8NCI6 653 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-207ENST00000556831 OR8J2Q8NGG1 315 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 OR5AK3PQ8NH89 298 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 STACQ99469 402 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 ACTRT3Q9BYD9 372 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 PTGES2Q9H7Z7 377 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 DUSP22Q9NRW4 184 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 PNPLA3Q9NST1 481 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 SIRT3Q9NTG7 399 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-207ENST00000556831 AIG1Q9NVV5 245 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 HRH3Q9Y5N1 445 aa12.86□□□□□ -0.35
SLIRP-207ENST00000556831 ZNF407Q9C0G0 2248 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 CELSR2Q9HCU4 2923 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 GXYLT2A0PJZ3 443 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 PRSS44E7EML9 344 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 SCDO00767 359 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 CPSF4O95639 269 aaKnown RBP12.85□□□□□ -0.35
SLIRP-207ENST00000556831 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-207ENST00000556831 ACP2P11117 423 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 AGAP20933 346 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 LCN1P31025 176 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 PTGER4P35408 488 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 CHI3L1P36222 383 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-207ENST00000556831 HBA1P69905 142 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 ZSCAN26Q16670 478 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 DUSP5Q16690 384 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 GSTA3Q16772 222 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 AAGABQ6PD74 315 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 IFNEQ86WN2 208 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 ZNF527Q8NB42 609 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 SLC16A11Q8NCK7 471 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-207ENST00000556831 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 ACTRT2Q8TDY3 377 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 CA5BP1Q8WTZ4 195 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 RND1Q92730 232 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 GIMAP5Q96F15 307 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 OTUB1Q96FW1 271 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-207ENST00000556831 SLC35G5Q96KT7 338 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 BTBD2Q9BX70 525 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 UBQLN3Q9H347 655 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 TAS2R10Q9NYW0 307 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 SPRR3Q9UBC9 169 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 TNFRSF10DQ9UBN6 386 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 CAMK2AQ9UQM7 478 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
SLIRP-207ENST00000556831 NINQ8N4C6 2090 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms