RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GIMAP5Q96F15 307 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 SPOCK3Q9BQ16 436 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 TMEM120AQ9BXJ8 343 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 RTN4RQ9BZR6 473 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 SIRT3Q9NTG7 399 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-224ENST00000556737 NTMQ9P121 344 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 FBXL2Q9UKC9 423 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-224ENST00000556737 USH1CQ9Y6N9 552 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 MYO9AB2RTY4 2548 aa9.4□□□□□ -0.91
SHMT2-224ENST00000556737 PKDREJQ9NTG1 2253 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 SLCO1B7G3V0H7 640 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 SCAMP2O15127 329 aaKnown RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 FADS1O60427 444 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 SNX3O60493 162 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 PEX11AO75192 247 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 TGDSO95455 350 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 IGKV1D-16P01601 117 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 HOXD4P09016 255 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 EFNA1P20827 205 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 EVI2BP34910 448 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 KRT20P35900 424 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 ASMTP46597 345 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 GFRA1P56159 465 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 GAB1Q13480 694 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 PTGR1Q14914 329 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 C6orf136Q5SQH8 315 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 NXNQ6DKJ4 435 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 GDF7Q7Z4P5 450 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 PLCZ1Q86YW0 608 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 RELL2Q8NC24 303 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 NUDT8Q8WV74 236 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 MTERF3Q96E29 417 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 ZBED6CLQ96FA7 236 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 WDYHV1Q96HA8 205 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 PPP3R2Q96LZ3 170 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 SIKE1Q9BRV8 207 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 C1orf50Q9BV19 199 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 NUF2Q9BZD4 464 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 ACSS1Q9NUB1 689 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-224ENST00000556737 ATP6V1HQ9UI12 483 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 CBLCQ9ULV8 474 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 OR10H1Q9Y4A9 318 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 MED12Q93074 2177 aa9.39□□□□□ -0.91
SHMT2-224ENST00000556737 TACC2O95359 2948 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 GOLGA8QA0A0J9YX86 632 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 GXYLT2A0PJZ3 443 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 GOLGA8OA6NCC3 632 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 TRPC5OSA6NMA1 111 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 GOLGA8NF8WBI6 632 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 HDAC3O15379 428 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 SCO2O43819 266 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 CBR3O75828 277 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 NKX2-2O95096 273 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 IL33O95760 270 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 EPPINO95925 133 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ACP2P11117 423 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 PRPS2P11908 318 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 SRD5A2P31213 254 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 CEACAM8P31997 349 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-224ENST00000556737 HPCAL1P37235 193 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ZFP36L2P47974 494 aaKnown RBP9.38□□□□□ -0.91
SHMT2-224ENST00000556737 B3GALT5-AS1P59052 145 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 MLC1Q15049 377 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 TOMM20Q15388 145 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 CYP27C1Q4G0S4 372 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 OR5M10Q6IEU7 315 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 MFSD12Q6NUT3 480 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 MEX3BQ6ZN04 569 aaKnown RBP9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ADGRE4PQ86SQ3 457 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 LACC1Q8IV20 430 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 RIMKLAQ8IXN7 391 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 PM20D2Q8IYS1 436 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 TNIP2Q8NFZ5 429 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 OR7A2PQ8NGA2 310 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ZFP28Q8NHY6 868 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 FBXO30Q8TB52 745 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 PIK3R3Q92569 461 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ABTB1Q969K4 478 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-224ENST00000556737 MS4A4EQ96PG1 132 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 G6PC3Q9BUM1 346 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 Q9N2J8 555 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 EQTNQ9NQ60 294 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ASIC5Q9NY37 505 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 HAO1Q9UJM8 370 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ABCG2Q9UNQ0 655 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 CAMK2AQ9UQM7 478 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 ARL2BPQ9Y2Y0 163 aa9.38□□□□□ -0.91
SHMT2-224ENST00000556737 DOCK7Q96N67 2140 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 NUP214P35658 2090 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 MBD3L4A6NDZ8 208 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 MBD3L3A6NE82 208 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms