RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SIRPAP78324 504 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 KEAP1Q14145 624 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 GANABQ14697 944 aaKnown RBP9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 PCLAFQ15004 111 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 POU4F3Q15319 338 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 SGCBQ16585 318 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 VPS26BQ4G0F5 336 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 EEF1A1P5Q5VTE0 462 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 MED12LQ86YW9 2145 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 CHDHQ8NE62 594 aaPredicted RBP9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 OR2M3Q8NG83 312 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 CEP70Q8NHQ1 597 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 FBXO30Q8TB52 745 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 JADE3Q92613 823 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 NINJ1Q92982 152 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 ZBED6CLQ96FA7 236 aaPredicted RBP9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 APOPT1Q96IL0 206 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 METTL2AQ96IZ6 378 aaKnown RBP9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 FAM111AQ96PZ2 611 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 PIGQQ9BRB3 760 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 PINK1Q9BXM7 581 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 PIGMQ9H3S5 423 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 REEP4Q9H6H4 257 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 EML4Q9HC35 981 aaKnown RBP9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 GALNT8Q9NY28 637 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 NDRG3Q9UGV2 375 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 ABCG2Q9UNQ0 655 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 ZNF337Q9Y3M9 751 aa9.57□□□□□ -0.88
SPTLC2-205ENST00000556607 SH3D21A4FU49 640 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 SLC22A20A6NK97 555 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 TTC36A6NLP5 189 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 DIAPH2O60879 1101 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 TGM6O95932 706 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 CD99P14209 185 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 DDX5P17844 614 aaKnown RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 SDC1P18827 310 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 EFNA1P20827 205 aaPredicted RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 PRPH2P23942 346 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 RPS3AP61247 264 aaKnown RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 SORDQ00796 357 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 SLC18A2Q05940 514 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 C17orf67Q0P5P2 114 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 BCL2A1Q16548 175 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 GRAMD1BQ3KR37 738 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 RFTN2Q52LD8 501 aaPredicted RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 ZNF385BQ569K4 471 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 OR2A2Q6IF42 318 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 Q6ZSR9 355 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 EXOC3L1Q86VI1 746 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 FADS6Q8N9I5 356 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 CDRT4Q8N9R6 151 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 GATSQ8NAP1 163 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 OR2T11Q8NH01 316 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 TWIST2Q8WVJ9 160 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.56□□□□□ -0.885e-9■■■■■ 39.9
SPTLC2-205ENST00000556607 CCT7Q99832 543 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 LMF2Q9BU23 707 aaKnown RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 TRMOQ9BU70 441 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 G6PC3Q9BUM1 346 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 MECRQ9BV79 373 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 PRRG4Q9BZD6 226 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 RTN4RQ9BZR6 473 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 FAM120CQ9NX05 1096 aaKnown RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 JKAMPQ9P055 326 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 SLC17A7Q9P2U7 560 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 CLCF1Q9UBD9 225 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 STOML1Q9UBI4 398 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 PACSIN3Q9UKS6 424 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 EIF3LQ9Y262 564 aaKnown RBP9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 VDAC3Q9Y277 283 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 CCL27Q9Y4X3 112 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 DNAJC15Q9Y5T4 150 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 MED12Q93074 2177 aa9.56□□□□□ -0.88
SPTLC2-205ENST00000556607 A0A1W2PNV4 684 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 OR2M5A3KFT3 312 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 TMEM114B3SHH9 223 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 TMEM233B4DJY2 109 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 B4DXG7 233 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 SHISA8B8ZZ34 492 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 H0YC42 278 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 PIP5K1BO14986 540 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 LSM1O15116 133 aaKnown RBP9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 EMC8O43402 210 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 NDUFB5O43674 189 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 PEX11AO75192 247 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 CHRNGP07510 517 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 ALOX5P09917 674 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 MAPK1P28482 360 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 ASMTP46597 345 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 TPD52P55327 224 aaPredicted RBP9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 DAZAP2Q15038 168 aaPredicted RBP9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 PON3Q15166 354 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 ARL13AQ5H913 290 aaPredicted RBP9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 KANK2Q63ZY3 851 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 VWA1Q6PCB0 445 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 FIGNL1Q6PIW4 674 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 ZCCHC23Q6ZST2 131 aa9.55□□□□□ -0.88
SPTLC2-205ENST00000556607 R3HCC1LQ7Z5L2 792 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms