RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ATP13A5Q4VNC0 1218 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SLC18B1Q6NT16 456 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TMEM207Q6UWW9 146 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 MOB3CQ70IA8 216 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 FRA10AC1Q70Z53 315 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 NET1Q7Z628 596 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 LDB1Q86U70 411 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 SERPINA9Q86WD7 417 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 GPSM1Q86YR5 675 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 FAM219AQ8IW50 185 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 LSMEM2Q8N112 164 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TCAIMQ8N3R3 496 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 GALNT16Q8N428 558 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CLEC1AQ8NC01 280 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TMEM185AQ8NFB2 350 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 OR56A4Q8NGH8 313 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 LILRB4Q8NHJ6 448 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CD200R1Q8TD46 325 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 C2CD4CQ8TF44 421 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SCARB1Q8WTV0 552 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SELENOMQ8WWX9 145 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 OR8D1Q8WZ84 308 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SMARCD2Q92925 531 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 STMN2Q93045 179 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 ZNF707Q96C28 371 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 BSCL2Q96G97 398 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 DCUN1D1Q96GG9 259 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 NSMCE3Q96MG7 304 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 BIRC8Q96P09 236 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 COPS8Q99627 209 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TUBA1CQ9BQE3 449 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 EBF4Q9BQW3 602 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 ZNF416Q9BWM5 594 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 DCLRE1BQ9H816 532 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SRD5A3Q9H8P0 318 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 RDH14Q9HBH5 336 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 BPIFA1Q9NP55 256 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 IL26Q9NPH9 171 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TMEM45AQ9NWC5 275 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SMOXQ9NWM0 555 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TAS2R1Q9NYW7 299 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 OR6C3Q9NZP0 311 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CD274Q9NZQ7 290 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 MALT1Q9UDY8 824 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 IL36AQ9UHA7 158 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 ZDHHC2Q9UIJ5 367 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 PRPF19Q9UMS4 504 aaKnown RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 CCL26Q9Y258 94 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 MYOFQ9NZM1 2061 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 IGLV3-16A0A075B6K0 115 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 A0A0B4J293 547 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 LOC100653049A0A140TA62 436 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 BBIP1A8MTZ0 92 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 HS3ST1O14792 307 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 AZIN1O14977 448 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 UBDO15205 165 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SLC16A5O15375 505 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 GRID2O43424 1007 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 DCXO43602 365 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 FKBP6O75344 327 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 KRT34O76011 436 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SLC25A14O95258 325 aaPredicted RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 CH25HO95992 272 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ADAP00813 363 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 FTH1P02794 183 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 UGT2B4P06133 528 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 C8GP07360 202 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 RPS17P08708 135 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 ALPIP09923 528 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SBK2P0C263 348 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 MPC1LP0DKB6 136 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PCNAP12004 261 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ANXA7P20073 488 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 EDN2P20800 178 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PIK3R1P27986 724 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ARRB2P32121 409 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SPINT3P49223 89 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ACADVLP49748 655 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 STK19P49842 368 aaPredicted RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 SRP54P61011 504 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 SUMO2P61956 95 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 CTAG1AP78358 180 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 CDKL1Q00532 357 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PLOD1Q02809 727 aaPredicted RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 KDSRQ06136 332 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 MAD2L1Q13257 205 aaPredicted RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 KLF9Q13886 244 aaPredicted RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 TSNQ15631 228 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 CDKN3Q16667 212 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ZNF284Q2VY69 593 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 UNC50Q53HI1 259 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 CTSL3PQ5NE16 218 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 LDLRAP1Q5SW96 308 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 GCNT6Q5T4J0 391 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PRAMEF20Q5VT98 475 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 LRRC66Q68CR7 880 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 C11orf87Q6NUJ2 197 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 AAGABQ6PD74 315 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms