RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 SLC25A36Q96CQ1 311 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 SGPP1Q9BX95 441 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 BRD7Q9NPI1 651 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 TBC1D29Q9UFV1 150 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 HCN2Q9UL51 889 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 RWDD3Q9Y3V2 267 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 AHCTF1Q8WYP5 2266 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 PTPRZ1P23471 2315 aaPredicted RBP13.94□□□□□ -0.18
CUX1-215ENST00000556210 OR2B3O76000 313 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 SLC2A10O95528 541 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 ATP5A1P25705 553 aaKnown RBP13.94□□□□□ -0.18
CUX1-215ENST00000556210 ATP12AP54707 1039 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 METRNLQ641Q3 311 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 LAIR2Q6ISS4 152 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 FIGLAQ6QHK4 219 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 IKBIPQ70UQ0 350 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 ZER1Q7Z7L7 766 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 TIGD4Q8IY51 512 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 OR8H3Q8N146 312 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 SAMD12Q8N8I0 201 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 OR2L5Q8NG80 312 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 SNX18Q96RF0 628 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 SLC38A3Q99624 504 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 GPR174Q9BXC1 333 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 RAB11FIP5Q9BXF6 653 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 SFXN1Q9H9B4 322 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 PLSCR3Q9NRY6 295 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 CHURC1-FNTBB4DL54 471 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 M0R082 166 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 ACSL1P33121 698 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 RPE65Q16518 533 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 ZMAT1Q5H9K5 638 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 ADGRF3Q8IZF5 1079 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 OR8D2Q9GZM6 311 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 MED28Q9H204 178 aa13.94□□□□□ -0.18
CUX1-215ENST00000556210 C6orf106Q9H6K1 298 aaPredicted RBP13.94□□□□□ -0.18
CUX1-215ENST00000556210 WSB2Q9NYS7 404 aaPredicted RBP13.94□□□□□ -0.18
CUX1-215ENST00000556210 LRIT2A6NDA9 550 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 PROM1O43490 865 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 RDH16O75452 317 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 GRK5P34947 590 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 SOX2P48431 317 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 CRYZQ08257 329 aaKnown RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 ENTPD8Q5MY95 495 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 ASB15Q8WXK1 588 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 NEURL3Q96EH8 262 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 SLC41A3Q96GZ6 507 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 ZDBF2Q9HCK1 2354 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 MAGEB4O15481 346 aaPredicted RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 AKAP8O43823 692 aaKnown RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 PIP5K1CO60331 668 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 GPX5O75715 221 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 ADH1BP00325 375 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 DRD2P14416 443 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 GSTM3P21266 225 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 BMP8BP34820 402 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 NXNL2Q5VZ03 156 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 CXXC5Q7LFL8 322 aaKnown RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 BMP8AQ7Z5Y6 402 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 LINC01555Q8NAE3 123 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 SLC37A3Q8NCC5 494 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 OR2T33Q8NG76 320 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 OR2L3Q8NG85 312 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 TMEM255BQ8WV15 326 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 ZFPM2Q8WW38 1151 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 SNAPC3Q92966 411 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 PRELID1Q9Y255 219 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 C17orf113A0A1B0GUU1 675 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 SSNA1O43805 119 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 OR6A2O95222 327 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 MAGEA2P43356 314 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 HTR3AP46098 478 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 MAP2K3P46734 347 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 PDX1P52945 283 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 TRMT12Q53H54 448 aaKnown RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 PAMR1Q6UXH9 720 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 PRICKLE2Q7Z3G6 844 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 Q8N402 240 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 CAMKVQ8NCB2 501 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 OR7G1Q8NGA0 311 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 FANK1Q8TC84 345 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 THAP3Q8WTV1 239 aaPredicted RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 PTCHD1Q96NR3 888 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 ERMAPQ96PL5 475 aaPredicted RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 PBX4Q9BYU1 374 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 A0A075B6Q4 140 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 A0A0A6YYC8 382 aaPredicted RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 I3L1I5 382 aaPredicted RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 CHRNB1P11230 501 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 BSGP35613 385 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 KCNJ5P48544 419 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 RPS25P62851 125 aaKnown RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 FBXO46Q6PJ61 603 aaPredicted RBP13.93□□□□□ -0.18
CUX1-215ENST00000556210 CCDC28AQ8IWP9 274 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 FGF14Q92915 247 aa13.93□□□□□ -0.18
CUX1-215ENST00000556210 MMABQ96EY8 250 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms