RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ABCG2Q9UNQ0 655 aa13.85□□□□□ -0.19
ACTN1-217ENST00000556203 SLC6A5Q9Y345 797 aa13.85□□□□□ -0.19
ACTN1-217ENST00000556203 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
ACTN1-217ENST00000556203 USP9XQ93008 2570 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 RNF103-CHMP3A0A140T963 221 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 PRSS51A0A1B0GVH4 220 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CBR3O75828 277 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CPSF4O95639 269 aaKnown RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 KRT16P08779 473 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 IDO1P14902 403 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 IL12AP29459 219 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CLK3P49761 638 aaKnown RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 SMSP52788 366 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 DGKQP52824 942 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 STX5Q13190 355 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 GRAMD1BQ3KR37 738 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CCNJQ5T5M9 372 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 WLSQ5T9L3 541 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 BHLHB9Q6PI77 547 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 EPGNQ6UW88 154 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 MARCH3Q86UD3 253 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CLEC4FQ8N1N0 589 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 RPRMLQ8N4K4 120 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 MARVELD2Q8N4S9 558 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 ZNF808Q8N4W9 903 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 FAM83FQ8NEG4 500 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 FAM110BQ8TC76 370 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 ADAMTS15Q8TE58 950 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 PHF10Q8WUB8 498 aaKnown RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CKAP2Q8WWK9 683 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 CDS1Q92903 461 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 ZBTB18Q99592 522 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 RTN4RQ9BZR6 473 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 PIGUQ9H490 435 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 DUSP22Q9NRW4 184 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 FAM120CQ9NX05 1096 aaKnown RBP13.84□□□□□ -0.19
ACTN1-217ENST00000556203 GIN1Q9NXP7 522 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 PPP4R1LQ9P1A2 415 aa13.84□□□□□ -0.19
ACTN1-217ENST00000556203 FLNCQ14315 2725 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 FIGNL2A6NMB9 653 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 B4DXG7 233 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 UBDO15205 165 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 ACVR2AP27037 513 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 RPS26P62854 115 aaKnown RBP13.83□□□□□ -0.2
ACTN1-217ENST00000556203 POU6F2P78424 691 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-217ENST00000556203 PDCD4Q53EL6 469 aaKnown RBP13.83□□□□□ -0.2
ACTN1-217ENST00000556203 HIST2H2BCQ6DN03 193 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 ACAD11Q709F0 780 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 C6orf120Q7Z4R8 191 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 ZAR1Q86SH2 424 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 OR4K17Q8NGC6 315 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 OR14L1PQ8NHC6 308 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 MAGEB18Q96M61 343 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 BTBD2Q9BX70 525 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 TBL1XR1Q9BZK7 514 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 OR2B2Q9GZK3 357 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 SDHAF3Q9NRP4 125 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 FBXO34Q9NWN3 711 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 ALKBH4Q9NXW9 302 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 DKKL1Q9UK85 242 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 EXPH5Q8NEV8 1989 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 LRRK2Q5S007 2527 aa13.83□□□□□ -0.2
ACTN1-217ENST00000556203 SLC22A3O75751 556 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 TGDSO95455 350 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 PGRP06401 933 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 BMP7P18075 431 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 MATN1P21941 496 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 SRD5A2P31213 254 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 IDH3AP50213 366 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 CRYZQ08257 329 aaKnown RBP13.82□□□□□ -0.2
ACTN1-217ENST00000556203 GSTA3Q16772 222 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 NHSL2Q5HYW2 709 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 TMEM211Q6ICI0 200 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 XKRXQ6PP77 449 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 APOOLQ6UXV4 268 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 GLB1L3Q8NCI6 653 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-217ENST00000556203 OR5D16Q8NGK9 328 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 OR4C3Q8NH37 302 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 DTNBP1Q96EV8 351 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 SLC35G5Q96KT7 338 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 OR7D2Q96RA2 312 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 OR52E6Q96RD3 313 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 TIMP4Q99727 224 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 G6PC3Q9BUM1 346 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 UGT2B28Q9BY64 529 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 SDR39U1Q9NRG7 319 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-217ENST00000556203 TAS2R10Q9NYW0 307 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 MED11Q9P086 117 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 PCDHGB3Q9Y5G1 929 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 FAM215AQ9Y5M1 114 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 KCNE3Q9Y6H6 103 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 NINQ8N4C6 2090 aa13.82□□□□□ -0.2
ACTN1-217ENST00000556203 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
ACTN1-217ENST00000556203 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-217ENST00000556203 WDR1O75083 606 aa13.81□□□□□ -0.2
ACTN1-217ENST00000556203 OXSR1O95747 527 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-217ENST00000556203 ANGPTL1O95841 491 aa13.81□□□□□ -0.2
ACTN1-217ENST00000556203 NGFRP08138 427 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms