RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PRAMEF7Q5VXH5 474 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 FIGNL1Q6PIW4 674 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 ZAR1Q86SH2 424 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 CALHM3Q86XJ0 350 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 FBXW8Q8N3Y1 598 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 SLC38A5Q8WUX1 472 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 PNPLA2Q96AD5 504 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 FRMD6Q96NE9 622 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 NODALQ96S42 347 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 SPATA9Q9BWV2 254 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 ANGPTL4Q9BY76 406 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 HOXD1Q9GZZ0 328 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 BCL2L10Q9HD36 194 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 A4GALTQ9NPC4 353 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 SACM1LQ9NTJ5 587 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 ABCD2Q9UBJ2 740 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 P2RX2Q9UBL9 471 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 ADAM10O14672 748 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 HS6ST1O60243 411 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 SNX4O95219 450 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 UTS2O95399 124 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ZIC2O95409 532 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-219ENST00000555323 CCL3P10147 92 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ARAFP10398 606 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ATP6V1C1P21283 382 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 CPOXP36551 454 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 CPA2P48052 419 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ATP12AP54707 1039 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 KLRB1Q12918 225 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 SYPL1Q16563 259 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 PLEKHN1Q494U1 663 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF766Q5HY98 468 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 SLC6A19Q695T7 634 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 TYW3Q6IPR3 259 aaKnown RBP11.63□□□□□ -0.55
SYNE2-219ENST00000555323 SLC30A6Q6NXT4 461 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 C16orf62Q7Z3J2 963 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ANKFN1Q8N957 763 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 TMEM178AQ8NBL3 297 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 FAM13CQ8NE31 585 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 OR4C3Q8NH37 302 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 OR10A6Q8NH74 314 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 GRHL3Q8TE85 626 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 C5orf34Q96MH7 638 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF583Q96ND8 569 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ECSITQ9BQ95 431 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 TRIM8Q9BZR9 551 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 C1orf21Q9H246 121 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 SLC38A1Q9H2H9 487 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 MTHFD2LQ9H903 347 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-219ENST00000555323 UBQLN4Q9NRR5 601 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 CMTM6Q9NX76 183 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 NDE1Q9NXR1 346 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 CALML5Q9NZT1 146 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 TMEM181Q9P2C4 612 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ABCG2Q9UNQ0 655 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 KLF13Q9Y2Y9 288 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-219ENST00000555323 ATMQ13315 3056 aa11.63□□□□□ -0.55
SYNE2-219ENST00000555323 DSPPQ9NZW4 1301 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 TNRC6AQ8NDV7 1962 aaKnown RBP11.62□□□□□ -0.55
SYNE2-219ENST00000555323 A0A0G2JPF8 293 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 A0A1W2PQD3 144 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 B2RBV5 119 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 HNRNPCL3B7ZW38 293 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ALG1L2C9J202 215 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 KLRC4-KLRK1H3BQV0 150 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ICOSLGO75144 302 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 UBOX5O94941 541 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 H6PDO95479 791 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 P04436 131 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 CHRM4P08173 479 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 HNRNPCL4P0DMR1 293 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 NR2F1P10589 423 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ADH7P40394 386 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 CRISP3P54108 245 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 GAS1P54826 345 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 PSME3P61289 254 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 CHRNEQ04844 493 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 BNIP1Q12981 228 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF141Q15928 474 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF630Q2M218 657 aaPredicted RBP11.62□□□□□ -0.55
SYNE2-219ENST00000555323 GRAMD1BQ3KR37 738 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 NADK2Q4G0N4 442 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 GPAT3Q53EU6 434 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 KLHL26Q53HC5 615 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 GCNT6Q5T4J0 391 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 APOOLQ6UXV4 268 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 FRRS1Q6ZNA5 592 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 GALNTL5Q7Z4T8 443 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 PTOV1Q86YD1 416 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 SULF2Q8IWU5 870 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF619Q8N2I2 560 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 TEX19Q8NA77 164 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 Q8NA96 180 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms