RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CASP3P42574 277 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 CRISP3P54108 245 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 MXRA7P84157 204 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 RBBP4Q09028 425 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 FUT5Q11128 374 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 SELPLGQ14242 412 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 SYPL1Q16563 259 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 CYP51A1Q16850 503 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 ZNF630Q2M218 657 aaPredicted RBP13.11□□□□□ -0.31
CHD8-208ENST00000555301 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 SLC6A19Q695T7 634 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 RPUSD3Q6P087 351 aaKnown RBP13.11□□□□□ -0.31
CHD8-208ENST00000555301 C16orf89Q6UX73 402 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 LRRC74BQ6ZQY2 392 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 GALNTL5Q7Z4T8 443 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 GALNT10Q86SR1 603 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
CHD8-208ENST00000555301 OR10A6Q8NH74 314 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 SLC38A5Q8WUX1 472 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 PMM1Q92871 262 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 NODALQ96S42 347 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 KLHL1Q9NR64 748 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 FBXO34Q9NWN3 711 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 KLRF1Q9NZS2 232 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 CNOT11Q9UKZ1 510 aaKnown RBP13.11□□□□□ -0.31
CHD8-208ENST00000555301 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 PRAMEF27A3QJZ7 478 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 B2RBV5 119 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 C5orf58C9J3I9 102 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 SCDO00767 359 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 FCMRO60667 390 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 ICOSLGO75144 302 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 UBOX5O94941 541 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 SNX4O95219 450 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 H6PDO95479 791 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 BCHEP06276 602 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 NUDT7P0C024 238 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 ARAFP10398 606 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 TBXA2RP21731 343 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 EVI2BP34910 448 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 DCTP40126 519 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 ATP12AP54707 1039 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 PSME3P61289 254 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 CDK6Q00534 326 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 INAQ16352 499 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 NADK2Q4G0N4 442 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 SLC30A6Q6NXT4 461 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 NET1Q7Z628 596 aaPredicted RBP13.1□□□□□ -0.31
CHD8-208ENST00000555301 PGAM4Q8N0Y7 254 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 C10orf111Q8N326 155 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 ANKFN1Q8N957 763 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 RNF138Q8WVD3 245 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 TMEM19Q96HH6 336 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 FAM173AQ9BQD7 235 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 SAP130Q9H0E3 1048 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 HHATLQ9HCP6 504 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 SPAG4Q9NPE6 437 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 MKLN1Q9UL63 735 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
CHD8-208ENST00000555301 DSPP15924 2871 aaKnown RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 PEX1O43933 1283 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 KIAA0513O60268 411 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 FADS1O60427 444 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 HNRNPCL1O60812 293 aaKnown RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 DNAJA2O60884 412 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 OXSR1O95747 527 aaPredicted RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 CHRM4P08173 479 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 T-ENOLP0DO92 83 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SLC7A2P52569 658 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 KCNJ2P63252 427 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 CHRNEQ04844 493 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 GPR68Q15743 365 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 ADRM1Q16186 407 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 GRAMD1BQ3KR37 738 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 PLEKHN1Q494U1 663 aaPredicted RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 PRAMEF20Q5VT98 475 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 TYW3Q6IPR3 259 aaKnown RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 ERICH5Q6P6B1 374 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 FRRS1Q6ZNA5 592 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 ZAR1Q86SH2 424 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 PACS2Q86VP3 889 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms