RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 DNAJB9Q9UBS3 223 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 RIMS3Q9UJD0 308 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 FAM32AQ9Y421 112 aaKnown RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 AHCTF1Q8WYP5 2266 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 USP9XQ93008 2570 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 CASQ2O14958 399 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-212ENST00000555254 CST1P01037 141 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 MT-ND1P03886 318 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 RAB40ALP0C0E4 278 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 MAP3K8P41279 467 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 PPICP45877 212 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 SLC37A1P57057 533 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 LARS2Q15031 903 aaKnown RBP16.32■□□□□ 0.2
PSEN1-212ENST00000555254 MAPK11Q15759 364 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 GRAMD1BQ3KR37 738 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF311Q5JNZ3 666 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 FAM198BQ6UWH4 519 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 CFAP46Q8IYW2 2715 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 LILRA2Q8N149 483 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 TMEM102Q8N9M5 508 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-212ENST00000555254 ICA1LQ8NDH6 482 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 OR1N1Q8NGS0 311 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF721Q8TF20 911 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 SNRNP27Q8WVK2 155 aaKnown RBP16.32■□□□□ 0.2
PSEN1-212ENST00000555254 PIK3R3Q92569 461 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 EME1Q96AY2 570 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 RMND5BQ96G75 393 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-212ENST00000555254 VPS50Q96JG6 964 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 SCN2AQ99250 2005 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 G6PC3Q9BUM1 346 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 NUDT9Q9BW91 350 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 PINK1Q9BXM7 581 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 SEMA6AQ9H2E6 1030 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 SLC38A1Q9H2H9 487 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 ARMC7Q9H6L4 198 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 AGPAT4Q9NRZ5 378 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 KLHL28Q9NXS3 571 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF462Q96JM2 2506 aa16.32■□□□□ 0.2
PSEN1-212ENST00000555254 C2orf92A0A1B0GVN3 265 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 CDC14CA4D256 554 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 SAGE2PA6NJ88 616 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 EIF4E1BA6NMX2 242 aaKnown RBP16.31■□□□□ 0.2
PSEN1-212ENST00000555254 GUSBP08236 651 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 DRD5P21918 477 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 KCNJ5P48544 419 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 KCNJ10P78508 379 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 KCNC4Q03721 635 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 FUT5Q11128 374 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 GPR68Q15743 365 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 DEFB109BQ30KR1 87 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 CYP27C1Q4G0S4 372 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 FIGNL1Q6PIW4 674 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 PAPD4Q6PIY7 484 aaKnown RBP16.31■□□□□ 0.2
PSEN1-212ENST00000555254 TMEM205Q6UW68 189 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF517Q6ZMY9 492 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-212ENST00000555254 PIWIL3Q7Z3Z3 882 aaKnown RBP16.31■□□□□ 0.2
PSEN1-212ENST00000555254 CYP4Z1Q86W10 505 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 OR2Y1Q8NGV0 311 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 OR52P1PQ8NH57 321 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 SDCCAG3Q96C92 435 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF347Q96SE7 839 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 TACO1Q9BSH4 297 aaKnown RBP16.31■□□□□ 0.2
PSEN1-212ENST00000555254 ITPAQ9BY32 194 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 SLC9A8Q9Y2E8 581 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 PCDHGA6Q9Y5G7 932 aa16.31■□□□□ 0.2
PSEN1-212ENST00000555254 SEC16AO15027 2179 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 PEX1O43933 1283 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 CNOT3O75175 753 aaKnown RBP16.3■□□□□ 0.2
PSEN1-212ENST00000555254 KCNK2O95069 426 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 IGKV3-11P04433 115 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 IFNW1P05000 195 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 DBIP07108 87 aaKnown RBP16.3■□□□□ 0.2
PSEN1-212ENST00000555254 CD247P20963 164 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 KRT20P35900 424 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 RFX3P48380 749 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 ARHGDIAP52565 204 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 PSMD4P55036 377 aaKnown RBP16.3■□□□□ 0.2
PSEN1-212ENST00000555254 PSPHP78330 225 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 CDC20Q12834 499 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 TBR1Q16650 682 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 DECR1Q16698 335 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 LRRC36Q1X8D7 754 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 EIPR1Q53HC9 387 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 CCNJQ5T5M9 372 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 LPCAT4Q643R3 524 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 PACS2Q86VP3 889 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 B3GNT7Q8NFL0 401 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 EXTL1Q92935 676 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 LCORQ96JN0 433 aaPredicted RBP16.3■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF354BQ96LW1 612 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 BTBD9Q96Q07 612 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 C9orf16Q9BUW7 83 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 FAM117AQ9C073 453 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 ZNF350Q9GZX5 532 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 C8orf4Q9NR00 106 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 MKLN1Q9UL63 735 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 CBLCQ9ULV8 474 aa16.3■□□□□ 0.2
PSEN1-212ENST00000555254 GPR55Q9Y2T6 319 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms