RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 C12orf73Q69YU5 71 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 C1orf94Q6P1W5 598 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PODNL1Q6PEZ8 512 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 DEF8Q6ZN54 512 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 C16orf62Q7Z3J2 963 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 METTL27Q8N6F8 245 aaPredicted RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 ATG16L2Q8NAA4 619 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 POGLUT1Q8NBL1 392 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 AQP11Q8NBQ7 271 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 ANKK1Q8NFD2 765 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 OR4D9Q8NGE8 314 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 ABTB1Q969K4 478 aaPredicted RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 UBE2FQ969M7 185 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 FKBP10Q96AY3 582 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 DOK1Q99704 481 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PRSS27Q9BQR3 290 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PLCXD1Q9NUJ7 323 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 MKLN1Q9UL63 735 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 MMACHCQ9Y4U1 282 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 HEMK1Q9Y5R4 338 aaPredicted RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 IGLV3-12A0A075B6K2 115 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 IGHV5-10-1A0A0J9YXX1 117 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PEX12O00623 359 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 OR2B3O76000 313 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 TPPPO94811 219 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 NTN1O95631 604 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 CKMT1AP12532 417 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 HTR2AP28223 471 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 CNR2P34972 360 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 KRT20P35900 424 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 SKP1P63208 163 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 CCL7P80098 99 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 ALDH6A1Q02252 535 aaKnown RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 PMS2P3Q13401 168 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 TOP3AQ13472 1001 aaPredicted RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 ZNF362Q5T0B9 420 aaPredicted RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 MRGPREQ86SM8 312 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 SPARTQ8N0X7 666 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 SLC9A6Q92581 669 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 RIT1Q92963 219 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 AHCYL2Q96HN2 611 aaKnown RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 POLR2J2Q9GZM3 115 aaKnown RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 TGIF2Q9GZN2 237 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 POLR2J3Q9H1A7 115 aaKnown RBP8.26□□□□□ -1.09
TDP1-210ENST00000554976 TIMMDC1Q9NPL8 285 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 KIF17Q9P2E2 1029 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 AASSQ9UDR5 926 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 KLHL3Q9UH77 587 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 GMEB2Q9UKD1 530 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 ORC6Q9Y5N6 252 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 TCRBV16S1A1N1A0A5B0 115 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 CDHR4A6H8M9 788 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 NTN3O00634 580 aaPredicted RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 NDUFB5O43674 189 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ABCB7O75027 752 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 NID1P14543 1247 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 DRD5P21918 477 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 CHMP24386 653 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 SEPHS1P49903 392 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ESRRGP62508 458 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 SLC13A2Q13183 592 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 CAMK2BQ13554 666 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ZNF141Q15928 474 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 AMZ1Q400G9 498 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ENTPD8Q5MY95 495 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ATAD3BQ5T9A4 648 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 FNDC7Q5VTL7 733 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 KIF18BQ86Y91 864 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 GRAMD2AQ8IUY3 354 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 SETD9Q8NE22 299 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 OR4N2Q8NGD1 307 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 RHOXF1Q8NHV9 184 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ZNF721Q8TF20 911 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 NACC2Q96BF6 587 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 CNDP2Q96KP4 475 aaKnown RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 RHNO1Q9BSD3 238 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 PRR14Q9BWN1 585 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ADAP2Q9NPF8 381 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ATXN7L1Q9ULK2 861 aaPredicted RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 MGAT4BQ9UQ53 548 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 NTNG1Q9Y2I2 539 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 WDR45Q9Y484 360 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 GMPPBQ9Y5P6 360 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 FRS3O43559 492 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ADAM11O75078 769 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 STX11O75558 287 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 CDC123O75794 336 aaPredicted RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 TIAF1O95411 115 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 DDAH2O95865 285 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 CDH2P19022 906 aaPredicted RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 MMP11P24347 488 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 OMPP47874 163 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 SLC37A1P57057 533 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ILKQ13418 452 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 PTGES3Q15185 160 aaKnown RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 RBM44Q6ZP01 1051 aaKnown RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 ZER1Q7Z7L7 766 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms